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52-0765-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19659118 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0765-1 - 5-prime edge 
    NTTCTNCNNT NGTTCGTTGA ATCAAAAGGT AGAATCGGAG AATCACCAGA 
    ATCTTGATTC CAATCTCCGT ATCGAAAACC AAGATTCCTT TTTGATTTTC 
    TAGGAGTTCT AGAGATATCT TCAAGCTTTA ATTCANAAGC TGAANATAAC 
    ACTGATTTGC ACTTTTTCTT CACATCATTG ATACGATCGT AACTAATCTT 
    AGGTGCGGAT TCATCTCTGT GCTTCTCCNC TAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19659234 [Map]; Strand: c
      • AT1G52780.1 - [+] show detail - Protein of unknown function (DUF2921)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0765-1 - 3-prime edge 
    CTTAGAAACT CGTCGACGAA GCCTATGAAT CTTGTTTCTT TCTCAGTCAC 
    AGATCTAGAT CTCCCACATC GAACCAAGAA ATACATAGGC AGTCAATGGT 
    GTTTTGCTTC TCGCGATCAC AATGTTTAGC GAATTACCAA GCT

AT1G52780.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF2921)
Computational Description
Protein of unknown function (DUF2921); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: cultured cell, callus, leaf; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2921 (InterPro:IPR021319); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF2921) (TAIR:AT4G21700.1); Has 114 Blast hits to 99 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR