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52-0794-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1411640 [Map]; Strand: c
      • AT5G04853.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -937; Region: promoter
      • AT5G04860.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0794-1 - 5-prime edge 
    CNTGAAAAAC TAACAAAAAT TGGTGTNTNN CTGGCGTAAN NTGATGNTNA 
    TAATGTNTNN TGTGGAGATN GANNNTTACT CCTCACTCCA ATAGTTCGNA 
    TTTAGGAAAT NTACCCGAGT TATTATAACG TGGTCTANTA AAANACGNTN 
    ACCTGTTTTT TCTTAAATGT TATTGAATCC AAAACCAAAA TCAATATATA 
    ATAGAAAAGT TTTCTCTCTA TTCAGAATAC CGATATCAGT GTGACATCGT 
    CTACTTAAGC ATCCATTTAA ATAAAATTAC AAGTTATAAT TTATTTACAA 
    TGTTCAATCA ATACATAAGT GGATGTGTCT AGAAAACCAC TCAAACCTTC 
    AAAATGTTAA GAAACATCCA TGAGTTAAGC CAGTCTCACC TTCCATCTTC 
    TAATTCGTCC CAAGCAAATA ATAAGCAAAA ACCAAGCAAA ACATAAGAAT 
    GAAAAAAAAT GTTTTCAAGA CTTATATTTT AGCCTTGTCG TCTCGGTCGA 
    TCTTTGGTTC TCCATACCAT TTTTCCATAT CTCAATACAA AGCTAAACAG 
    TAAAAAAAAT TTATAAATAG TTAAATACTC ATATGTTTCT AATAGATTAT 
    TATTTTGGAA TAAAAGTTGA TATATTTACG TTTTTCACAT TTTATCAACA 
    AAACAAATTT TTTGATATAA TTTACATATC AAATATTTTT AATGATTATG 
    AATTAATATG CAACGGGACT TGTTTCATTG GAATCGGGCA ACGAGGCGGG 
    CCTTGTCATT ATCTAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1411693 [Map]; Strand: c
      • AT5G04853.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -990; Region: promoter
      • AT5G04860.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon4 (3UTR)
    Flanking Genome Sequence: 52-0794-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TNANGNGACC TGGNCNTGCG GATNCTCANA GAAAGGANAA CATCCGTNTT 
    CTCTATACAC TANTNNAACN CTNTAACCNC CAGGAGCGGA GCTCAGTTAN 
    GGATCTAAGA CCCACNANCT ATTGCTGAAT TGGCTCGCCA ATGACCAAGC 
    CACTGTCACA GACACAGCAN CTTCTGACAC AGTTACTTCG GTTGCAGAGG 
    ATTCAAACAT ATTAGGTTGG TGGTGATGAA GGTGTTTCGT GTAGTGAAAC 
    TCAATTTGAA GACGGTGATG CAAAGATGAA ACCANTCCTT NCTTGATATC 
    AGATANNNGN TGCTGTNTTG NAATCGGGNG CNAGAAAGCT NTTTNGTACT 
    CTCTANAGGG GGNGTTTANA TNGANANANN AGGCNCTTGG NGGGNTGNNA 
    NTNTGANNNN GGGNNNTNNA AAAANCCCCN GANNAAAGGG AAAANTTTAT 
    NNNGANGNTT TNNNGATNTT GNAANNAAAA AANTNTNGGG AAANGGGGGG 
    AACGCGNGNN TTNNNNCNCN NNCCCNAANN GGCNNNNNNN AGNNCNNTNN 
    AAAAANNCCN GGGGGNNAGG GGNNNTTTGN NNNNNTNNGG NTCTNNNGAN 
    GAAAANGGNG GNGNGGNNGN GGGG

AT5G04853.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G04860.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR