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52-0810-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 637196 [Map]; Strand: w
      • AT3G02880.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 52-0810-1 - 5-prime edge 
    CTCAAATTGA GATGAGACCT ATCAGTTTCT TTTTTTCTTT CTTTCTACTT 
    TTCTTTCTTT CCAAAGTTTT AAAAATGTCT ATAAAACTAT TGCTTTTGCT 
    AATTTTTGTA TAAATATATA GTTGATTGCG TCTGAATAAA TTGGTTTTTG 
    TTTTCTTCAT TTCACATCTT ATCCCAGAAT CCTAGTCAAC GATTCAGCCA 
    AAAAAACAAT GTCAACGAGT TTTATTTTTT ATCGCCGTCC AAAATTTTGA 
    GCCAAAAACA AAGTCAACGA CAAAAGTGGT CATGAATATC GTCTCACGAT 
    TGACTGACAA ATACTTCACG ATTTGATTAG ATTTGAAGTT TTATAATGTG 
    AAGTTGGTAA CCACTAACTA ATAACCCTAC TTCACAGGAG AAAGAAAAAA 
    CATTTTAGAT ATGAAAAAAA CAACATTGAC CCAGAATGCT TAGAGATTAT 
    GTATGAAGGA ATTACTAGTG CTGATAAACT ATTTAGTTCA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 637130 [Map]; Strand: w
      • AT3G02880.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 52-0810-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATTTATA 
    AATTTGAGGC TCAAGAATTA ACGAACAAAC TAGAACAAGA ACAAAGAAGA 
    AGAAGTAGAA AAAAGGCGGG AAGTGGGGTC GACACTATTC AAGAAATTGC 
    AACTTGACCC CAAACAATAT TCAAATCAAT CAATTTAGAC CCCCAAAAAA 
    TCAGTCGGAT ACAGGATTTG GGGAGCCAGA TGAATGAGAA ACCTCCTCAA 
    TGAGTCTGGT GACTTCAGCC ATCGAAGGAC GACTATCTGG GAACTGAGCC 
    GTACAGCTCA TACCGATCTT CAATAAACGA ATGATGTTCT CATTGCCCTC 
    AGGTTGGTAC CTTGTGAGCT CGGGATCAAG CACATCGGAC GGTGTTTGTT 
    GCTCGGTAAC AGATTGGACC CATCTCGGCA AATCTACGCC TTCTTCATTC 
    AACTGCTGAT GCGTTGGAGA CTTACCTGCA ATGTAATGTT CCATGTTAAA 
    ACCTAGAAAC CACAGCAATT GCAAAAAAAG CAGTTAAAAA GATATATCTA 
    TCCTTGATTG TTTGTTACCT GTGAGTAATT CAAGGATTAG GACGCCAAAG 
    CTATAGACAT CAGCTTTTTG GGATATTTTG CGAGCATCAG TGATTTCAGG 
    GGCACGGTAG CCATCAATAC GGTTAGGTGC AGATGTAGAA CTAATGATGG 
    GAGCAAGACC GTAATCAGAG ACCTTAGCTT CATAGGAGTC AGATNATAGT 
    ATGTTCGAGG ACTTAATGTT TCCATGAAAA G

AT3G02880.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: anchored to plasma membrane, cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G16590.1); Has 140419 Blast hits to 103539 proteins in 3753 species: Archae - 105; Bacteria - 10616; Metazoa - 37369; Fungi - 7261; Plants - 69256; Viruses - 279; Other Eukaryotes - 15533 (source: NCBI BLink).
Link
InterPro Scan - TAIR