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Mutant Lines
52-0828-1

52-0828-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 22201081 [Map]; Strand: w
- AT3G60110.1 - [+] show detail - DNA-binding bromodomain-containing protein
  Distance: 0; Region: exon3 (CDS)

GGTAAAAAGA AGGTTGAGGT AGAGAATAAT AATAGTAAGA GCTCATCGAA 
ACGAAAACAA ACGAAAGAAA CAGCAGAGGT GGCTACTGGA AAACGAGGTA 
GGGAATCGGG AAAAGACGAT AAACAGCCAA GGAAAAGAAG CAGAAGATGA 
AACTGAACTA GCCTGTGGTT AAGCATTTGT ACATTTGATG TGCCAGAAGT 
ATTCATCATT CCTCTTAACA TCACTGTTTC GGAGGGAATC ATAGGTCTTG 
TTAGGTATTT ATTCTCATAG TTACCAGTTT AGTTTTTTTT TTGTTNAAAC 
NGNGTTTTCC TTGTTANAGG GTNTAACTNT AGGGGTTNTA AACNGGGTCT 
TCATTTATTN GNCTAGTTNG ATCAATTCAT GTNCNCAAAA CCTGAANCCC 
GGTTTTTACT TTGGCANTAA AATCAAATNT CAAANAACNT CANTTTTTNC 
AGANCCCTTA NGGCCCNTAA AGCCAATNTT NATCATNGTN GTTTNGCCCT 
TTTTCCAATA TGTCCCCTAT TAATATTGGG CCANAGCTCA TNTTTTGCCA 
NANAAAATCT ACAAAAAAAA TGCAAATGCT CTACTTTTTT TTTCCCCAAA 
AAANCCCCAN TTTTTNNTGN TTTTTAAAAA AAANNTTTTT TNCNNTTTTT 
AAAAACCNGG GAGGGGGTTN NNACCTTTTT TGGGAGAATT TTTTNANTTN 
A

3 prime edge [+] show sequence
1. Chromosome: 3; Position: 22200965 [Map]; Strand: w
  - AT3G60110.1 - [+] show detail - DNA-binding bromodomain-containing protein
    Distance: 0; Region: exon3 (CDS)
Flanking Genome Sequence: 52-0828-1 - 3-prime edge
```
TTTTTACCGC GTACTACTCC NNAATTCCCT CGGTTTCACT TTACTGTNCT 
CTTTCTTAAC GTTTCCATCA CTCTTCTTCT GATGATCGTT CTCTTTCTTA 
ACGTTTCCAT CACTCTTCTT CTGATTTTTA CTCGTNGTTT CTTTTCCTTT 
CTGTGGAGAG TNCNNCGGCC ANCCGCTT
```

AT3G60110.1

Model type: Protein coding
Short Description: DNA-binding bromodomain-containing protein
Computational Description: DNA-binding bromodomain-containing protein; FUNCTIONS IN: DNA binding; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1); Has 40209 Blast hits to 25016 proteins in 1620 species: Archae - 68; Bacteria - 5263; Metazoa - 15621; Fungi - 3406; Plants - 1675; Viruses - 190; Other Eukaryotes - 13986 (source: NCBI BLink).
Link: InterPro Scan - TAIR