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52-0849-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19352084 [Map]; Strand: c
      • AT2G47140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-0849-1 - 5-prime edge 
    CNTTTNAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CTTCAAATTT TCATAACGTC TCAACAATGT 
    CTGGAAAAAG GCAATTTCCT CATCTGATTT TGTAACCTTT CTGCTCAACT 
    TTATACCCAT ATACATAAAT GTGTGTTTCT AATGATTTGT TTTTTTTTTC 
    CAAATNGGAN GGCAAAATCG NAATTATTAC NGGCGGACCA AGCGGNATNG 
    GGGCTGAGTC CGTTCNATTN TTNACCNAAC NCGGNNCTCN AGTCGNGATC 
    GTNGATGTNC AGGATNANCT CGGNCAAAAC GTNGCAGTTT CNATCGGGGA 
    AAACAAAGCN AGTTACTNTC ATNGCNATGT CNCAAACNAA ACGGAAGTNG 
    AAAACCCCGT TAAGTNCNCC GNCNAAAAAT NTGGNAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19352091 [Map]; Strand: c
      • AT2G47140.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -3; Region: promoter
    Flanking Genome Sequence: 52-0849-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGAGCTACGA GAGAGCTATG TGTGGATATT TATACATGGG GGTATATGTA 
    TCTTAAAAGT CAACTCTATC GTGCCATGTG AGTTTTACTT TTTTAATGGC 
    TCAAGAATTG GTTTGACCTC TGAATTATGC ACCATAATAG TGACACNTTG 
    TTCCTATATA ATAATGTTTT TATTTGGTTG AAAAAAATAT ACACACTTTA 
    ATAAGTAAAT AACCGATTTT ATTTATTTAT TTAGTTTCAA ATAGGCTTAA 
    CGACGCAAAA ACCACCGTCC ACTGCTAAAT TCTGACCACT GATATAAACC 
    GAATCATCCG AAGCGAGAAA CAGAGCAGCT TCTGCCACGT GTCGAGCCTT 
    TAACACAACA CCTTTAAAAA TCCCTCTGGC TTCGCAATAC TCCTCCGTCT 
    GCTTCGCCGT CTCCTCGTCG TGACTAGTCA TCCCCGTGAC CCCGTCGCCA 
    CAGCGAACGG TGCGACGCCG TTTATTCTAA TCCCATGTTT CCCTAAATCA 
    CCACAAACCT ATTTAATCAG TCCGACNAGC CCATGCTTCG ACGCCNNGTA 
    TTCATGAGGT CCCTGACCAC NATCTCCNAC NTAACACTGG NCGACAAACN 
    ATGGANCCNC NNGTGCCTTT CTCCNCCNTG GCTNGNGCGG NGNGNNNNAT 
    AN

AT2G47140.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G47130.1); Has 112960 Blast hits to 112749 proteins in 3532 species: Archae - 956; Bacteria - 74077; Metazoa - 4904; Fungi - 6164; Plants - 2566; Viruses - 5; Other Eukaryotes - 24288 (source: NCBI BLink).
Link
InterPro Scan - TAIR