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52-0869-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 519117 [Map]; Strand: c
      • AT4G01240.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 52-0869-1 - 5-prime edge 
    GCGTCAATAG ACCCATCTAT GTGTTGGCAG GTTTGGCTTT TCTTATCTCA 
    GTAGCTACAT TAGCTAAGTT CAACTACATC ACTCCACTAC GCTTCTCTGA 
    TCGGTTCTGT AACTATCATG GAAGCTTTGA CGGCGACAAC TACAACATCG 
    GAAGCCAAAT GAGAAAGACA ATCGAAACCG CCATTTTTAA AATCCACCAA 
    GAAATGGATG ATCTCAAGGC TTTAGAAGCT AATTCTTCTA CTCCTCCATC 
    CTCTGTTTCA TCAGCTTCAG GATCCATGTT TAGGCATGTA GCTTTTCTTG 
    CGGATGTTCT TTCGCTAGTT CAGTCGGTTC ATATGGAATT GCCTTCGTTC 
    GAAGAGAGAT CCGTNNCNNA TCATCCGNNG AANCANCANA AAGGNGACCC 
    TGGNGAGCNT TTTNTGNNAG ANGAGATNNN NANNNNCATA AANAAAAAAN 
    NNNNNCNNNN NNNGNA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 519233 [Map]; Strand: c
      • AT4G01240.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 52-0869-1 - 3-prime edge 
    ATTGACGCCA TTGAAAGCTC TGATCTTCGA TAATACATTC GTCTTCCCCA 
    TCCCTCAAGC TCAGACAAAA TCAACAAGAA CACAAGCTAA CACCATCTTC 
    TTTTGTCTTT TCTTAGAGAA GATCTGAAAT GAGAAGCAAA ATACTCAAAA 
    TCTAGTTGCA GAGATAAAGT TGTGAACTTT AACTTCATCT TGCAGCTAAC 
    CTAGGGATTA GTGGAATTAA TATAATCCTT GGGAAATTAT CTAATAGTAT 
    TCAACATACT TAAAGCACAA GCGTAGTAGA ATGCACATGG AGATTTCTGA 
    AGTTTATAGG AAATGCCACG ATGGTACAAG GCTAAACCCA AGAAAAGTTG 
    CTGAATT

AT4G01240.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05390.1); Has 456 Blast hits to 442 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 455; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR