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52-0884-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7771203 [Map]; Strand: c
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0884-1 - 5-prime edge 
    GGTGGATGGA ACTTTGTAAG AGAGCTGACT AAAGAGATTG TTGAGATTTG 
    ACTCGTAGAG ACTTTTTGAG GTAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7771319 [Map]; Strand: c
      • AT3G22060.1 - [+] show detail - Receptor-like protein kinase-related family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0884-1 - 3-prime edge 
    CATCCACCGG TTTTGCCGCC TCCTCCACTG GCAACACTCC AAACAACGTC 
    AACGGTTTGG CCCTTTGCCG CGGTGATGCC TCCTCCTCTG ACTGCCGCTC 
    TTGTCTTGAG ACTGCCATCC CCGAGGTAAC CACACAATAT TTACATAAGT 
    TTTTCTACAT CTTAGTGATA TATATAGAAA CCGCAGATTA AGTACAAAAC 
    AAAACTAGGT TATAATTAGT TTATTTACAT TTCTAATGCC AATTTTTTAT 
    TTCATACCCT TTTCTTTTTT GAAACTACAA TCTATAATTA GAGACTGGCT 
    AAATTTCATT TGGAAAAATG CTATTCTATT GATAAAAAAT AGTTGGAAAA 
    AAAGATATTA TATATTGGAA CGGCAAGAGA AGCATAAATA GTATATCGAG 
    TTCAATGATG GTTCTTGACG TTGGTGTCAC ATATGACAGC TACGTCAGAG 
    ATGTCCGAAC AACAAGGCGG GAATAGTATG GTATGACAAC TGTCTTGTAA 
    AGTATTCCTC GACCAATTTC TTCGGGAAGA TAGATTTCGA GAACAGGTTC 
    TATTTGTACA ACGTCAAAAA TGTGAGTGAT CCATCAACAT TCAACTCGCA 
    GACGAAAGCT CTTTTAACCG AGCTGACAAA GAAAGCGACT ACTAGAGATA 
    ACCAGAAGCT ATTTGCGACA GGAGAGAAAA ATATCGGAAA GAATAAATTG 
    TACGGACTAG TGCAATGTAC GANGGACTTG AAGA

AT3G22060.1

Model type
Protein coding
Short Description
Receptor-like protein kinase-related family protein
Curator Summary
contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain
Computational Description
Receptor-like protein kinase-related family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to abscisic acid stimulus; LOCATED IN: cell wall, vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF26) (TAIR:AT3G58310.1); Has 1682 Blast hits to 1490 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1682; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR