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52-0917-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19830971 [Map]; Strand: c
      • AT1G53180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -470; Region: promoter
    Flanking Genome Sequence: 52-0917-1 - 5-prime edge 
    GTCAGGACAG TCCACAAGCC ATGTGATTTC TCTGTTTATA TACNTNAGTA 
    TATTNTGTAG TACNGTAGGN NAATAGTANG AGGATNTTAA ATATGTGTAT 
    GTGGGNGAAN NCTATACTAA GATNGGGAGA ANANAAACTN NGGATGAGAG 
    AGAAAAAATN TTTGTNGAGG GGGGNGGNAN CTNNGTCACA CANAANTNCN 
    GGNTTCNCCG AAAAAGAGCC GANGGGTAAA AAGGGGNGGA NAAANGGGGC 
    CCAGNTGNGG GGTAAAAACC AACAANNGGG GGNTCNCCCA NCAAAAAANC 
    GANANNTTTT NAGGGGGGGG GGGGGAGNGN NGGTNATATT TTGGGTNCGC 
    NNCCCGGGGG GGATAATAAA AATNTTTTTN AAAACCCCCN AAAAATNGGG 
    GGGGGNCAGG GNGGTNTTTT TCCANTAAAA AAACAACNNT NTTTNTGGGG 
    GGGNGGGGAA AAAAAAAACA AAAAGGGGGG NNCCCNCCCC NCCNAANAGN 
    TTNNGGAAAA AAAAGAGTGT TTAAAAAGGG CNCCCCCTCT CNNTNTAAAA 
    AAAAANANNT TTNGAGGANA GAGAAAATCT NTCNCCCCCA NAAAAAANAG 
    GGGNNNGGGT NTTTGANNGT GTTTNTTTTT TTTTTTTTTN NTTANNCCCC 
    CNNCAAAAGA AAAAANNGGG GGGGGTTTTT CCNNAAAAAA AAAAAAANNC 
    ACCTTTNTGG GGGGNCCCCC CTAGGAAANN NAAAAAAAAA AAAAACGNGG 
    GGGGGNAAAA AAAAAGNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19831087 [Map]; Strand: c
      • AT1G53180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -354; Region: promoter
    Flanking Genome Sequence: 52-0917-1 - 3-prime edge 
    ATCCGGACAT NGATNAATTA GNGNGTCNTC GCGGNAGCNA NCGGANTTNN 
    GTTGAATCTT TTTTTATTTC NTAGGNGTTG TTGCCAAAAT TATGTATTTN 
    ATTACCCACT TTAGATACCT CTAATTTTAC ATAANTTTCA ATATACCTTA 
    TATAGTTGAC TCTATTGCTC TAGAATTGTT AATATTTTTT ATTTTGCAAT 
    AAGTTCCAAT TTCAGCATTA TTTTTCACCG GGAAAATCCT TAAAATATTC 
    TATGCAAAAT CCAATATATT CACTCCACAT AGATAATAAT AAAAAACTTA 
    TAAAAGAAAT AATTGAAGAA AGGCTGCCCA TGTGGGCACT TCCAAATAAA 
    TCTCCAGAAT CGATGCTTCA AATACATTGG ATGTTTACTA AACAACACAG 
    ATATGAACAA ACTTCAACAA ACAAACACAC CCACAAAGGG AAAATCCGAA 
    GACCCGATCT CTGCTNCTCC NCTA

AT1G53180.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Link
InterPro Scan - TAIR