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52-0928-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 345502 [Map]; Strand: c
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -375; Region: promoter
    Flanking Genome Sequence: 52-0928-1 - 5-prime edge 
    GAGTGAGCAC CGTTTACGCT ACTTCTCCAC TGTGTGCATT CAATGAAGTG 
    ATTCTACTGA AAATCTTATA TAAACTATAC ATGCATGATG CATTGAGATG 
    CATATGTTTT TATAATTGAC ATAAGATTAG TAAACACATG CGTGAGTGGT 
    ACGACTAATC TAAGAGTAGT AGTGCTTGAG GTGTGGAAGC TCTCTCTCTC 
    TACACCTTCT TCTTCATAGA TGGATCGTCT AAAATCACTT AAGTAATTAT 
    CTGTATAATA AAAGAAAGGA AATGATGGCG TANCAATGCA TGCTAAGGGA 
    CAAGAAAGGC TTCGGGGGAG ANATCACTTC TCTTCTACTC CATCCTCTTT 
    GTCTCTGCTN CTCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 345572 [Map]; Strand: c
      • AT5G01890.1 - [+] show detail - Leucine-rich receptor-like protein kinase family protein
        Distance: -445; Region: promoter
    Flanking Genome Sequence: 52-0928-1 - 3-prime edge 
    AATTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCTTNCTTGA CCCGNCCGCG CGGAGACTTA CTCANGTCCN CTNNTCTTGC 
    GNGNCCNATC GTACGAATTT TTTTATTTAT TTTGTTGGTT TTTATCTGTG 
    AATCATACAA CTAGTTTGAT GGAAACTAAC TCCTTTATTA TCACTCACTA 
    AAAAAAAAAA AANCCCNTTT TTTNNNCCNC CCNAANTTGG GGGNNATNAA 
    NTNANNANAN GGGNAAAAAA AANGGGGNNA NGGCNNGNTT NNANNTTTGG 
    GGGAAAAAAA AAAAANNNCC CCCCNAAAAA ANNNAAAAAN TTCCCTTTNN 
    TTTNTTNCCA AAAAAAAANN NCCCCNTTNC CNNTTTTTTN NTTCCCCNNN 
    NAAAAAAAAA AAAAAAAAAA AGGNNNCCNN NGGNNNTNCC CCCNNNNTTT 
    NNNNCCCCCC CCCCCCCCAA AAAAAAANNT TTNNNNTTTT TTTTAAAAAA 
    AAAAAAAAAN CCCCCCCCCC CNNTTTTTTN NGGGGGNNAA AAAAAAAAAN 
    TTTTTNAAAA ANGG

AT5G01890.1

Model type
Protein coding
Short Description
Leucine-rich receptor-like protein kinase family protein
Computational Description
Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G56370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR