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52-0985-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17591188 [Map]; Strand: c
      • AT5G43780.1 - [+] show detail - Pseudouridine synthase/archaeosine transglycosylase-like family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0985-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAG CTTAGCGAAG GCTGGGCAAG TCCTCTCAAA 
    GGTTTCATGA GACAGTCAGA GTTCCTCCAA ACACTTCATT TTAACTCGTT 
    CCGGCTCGAA GACGGCTCCG TCGTCAACAT GTCGGTTCCG ATCGTCCTCG 
    CTATCGACGA CGATCAGAAG TTTCGTATCG GGGATTCCAA CCGAGTCACG 
    CTCGTTGACT CGGTTGGTAA TCCCATCGCG ATTCTCAACG AGTAAGTCTC 
    TCTTCCTAAT TCTGCAATTG AAATCATCAA ATGTATGCAT AAGAAACCTA 
    ATTTGTAGAA AAATCATCTT GCTTTATACT GATGATTGGT TGATTGAATT 
    TGAATAGTAT TGAGATTTAC AAGCATCCGA AAGAAGAAAG AATCGCGAGA 
    ACATGGGGAA CCACGGCTCG TGGGCTTCCT TATGCGGAAG AAGCAATCAC 
    CAAAGCTGGA AACTGGTTGA TTGGAGGTGA TTTACAAGTG CTGGAGCCGA 
    TCAAGTACAA TGATGGTTTA GACCGGTTTC GTTTATCTCC GTCGCAGCTG 
    CGGGAGGAGT TTATAAGGCG CGGTGCGGAC GCGGTTTTCG CGTTCCAGCT 
    TANGAACCCG GTTCATAATG GTCATGCTCT TCTTATGACT GATACTCGTA 
    GAAGGCTTCT TGAGATGGGT TACAAAAACC CTGTCTTGTT GTTGAATCCA 
    CTTGGTGGGT TTACTAANGC TGATGATGTA CCTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 17591201 [Map]; Strand: c
      • AT5G43780.1 - [+] show detail - Pseudouridine synthase/archaeosine transglycosylase-like family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0985-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    CCACTCTAGA TCCACACGGT TCAGCTTGAT CCTTACCGGA ACCGTCTCCG 
    CCTCGTGCTT CATCACGCGC CGCCGTGATT CTTCGACTAC GAGGTTCATG 
    AGTTTTCCTC CGTCAGGCTC GATAAGTCCC GATTTAACNG GAGAGGCCAC 
    GGCGGGAAAC TCGACGGGGG AGAGATACGA CGGAGATGGA TC

AT5G43780.1

Model type
Protein coding
Short Description
Pseudouridine synthase/archaeosine transglycosylase-like family protein
Curator Summary
sulfate adenylyltransferase, ATP sulfurylase
Computational Description
APS4; FUNCTIONS IN: sulfate adenylyltransferase (ATP) activity; INVOLVED IN: sulfate assimilation; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: Pseudouridine synthase/archaeosine transglycosylase-like family protein (TAIR:AT4G14680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR