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52-0993-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8076457 [Map]; Strand: c
      • AT5G23930.1 - [+] show detail - Mitochondrial transcription termination factor family protein
        Distance: -459; Region: promoter
      • AT5G23940.1 - [+] show detail - HXXXD-type acyl-transferase family protein
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 52-0993-1 - 3-prime edge 
    CTAANAAACC ATGGTCCAAA TATTACAATT CCAAACCAAA CACACTACAT 
    AATCATACAA ATAACCCACA CACGCTTATT ATCAACCACG AGCACATTAT 
    TACCATACTT AAAAAGCCAT AAGGTTTTTC TCCTTAATCA AATTAATTAG 
    CTAATTAACC AAAATATNTT NTTTGATTAA TTATCTAATT AACCTTAAAC 
    TAAACAAACA CTCAAACAAA CCCATTGCCA TTTCCATTGA CATAGCCATT 
    ACCATTACCA TTGACATGGC CATTACCATT GACATGGCCA TTACCATTGG 
    TGAGCTTCTT TCCATCATCT TCTTCTTCCT CCTCACTAAG TAAAAACTCT 
    CTGCTNCTCC ACTA

AT5G23930.1

Model type
Protein coding
Short Description
Mitochondrial transcription termination factor family protein
Computational Description
Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT1G62085.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G23940.1

Model type
Protein coding
Short Description
HXXXD-type acyl-transferase family protein
Curator Summary
Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.
Computational Description
PERMEABLE LEAVES3 (PEL3); FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: epidermis morphogenesis, localization, trichome morphogenesis, cutin biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: cytoplasm; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT2G39980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR