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52-1017-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8394326 [Map]; Strand: w
      • AT5G24550.1 - [+] show detail - beta glucosidase 32
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 52-1017-1 - 5-prime edge
    CCATTCTTGA TAAGTTCATC TATAAGATTC TTGTAGAATT GAACACCTTC 
    TTTATTTACC CCATCGCTTA ATTTTCCACC TGATAATTAA AAAAAAATGG
    AAAGATAGAA AGCATTTCTT ATCAGAAAAG GTTAAAACAA AAAAAAGCAA
    GTTCCATCTA TAAAAGAAAG ATCTTAAACC TGTATACTTA CTTGGTAGTA
    TTCTTGACCA GGACAGGGAA AATCTGAAAC TATCCATATT CATTTCCTTT
    ATTAGTTTGA TGTCGTCCTG TCAATACATA AGTTGTTGCC ATTAGAAAAC
    AAGAGAAACA TTACTTAAAG CT

AT5G24550.1

Model type
Protein coding
Short Description
beta glucosidase 32
Computational Description
beta glucosidase 32 (BGLU32); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 31 (TAIR:AT5G24540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR