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Mutant Lines
52-1018-1

52-1018-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 7972561 [Map]; Strand: w
- AT5G23660.1 - [+] show detail - homolog of Medicago truncatula MTN3
  Distance: 0; Region: intron5 (CDS)

GTTACGTGCA ATACATGTAC AAGTCTATGT AACATATTTG TAGATAGAAC 
TCTTTTGTTA AAGATATAAT CTTTAGTGTT TAGTGGGATA TTTAAATGTA 
AAACGACAAC AATACCGAAC AAAAGGGTTT TGCTTTTTGT GAATTCATAT 
CTCTCTTTAT CTATGATTAG CATCATAGGC TCAGGTAAAA TAGAAACAAA 
AGCAACCACT TCATGCAAAT AACGATAATG ATTATGATAA TGATGACTTA 
CGGCAACATA GATATCCTTA AGANCAAGAC CA

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 8394210 [Map]; Strand: w
  - AT5G24550.1 - [+] show detail - beta glucosidase 32
    Distance: 0; Region: intron5 (CDS)
Flanking Genome Sequence: 52-1018-1 - 3-prime edge
```
AAGAATGGTC AGCATCGATC ATATGCTTAA TTAGTTAATT ATAATGCCAC 
CTATTAAATT TTACACGTCA ACTCTTTGAT TTAACATTTT CAAAGAGAAT 
T
```

AT5G23660.1

Model type: Protein coding
Short Description: homolog of Medicago truncatula MTN3
Curator Summary: homolog of the Medicago nodulin MTN3
Computational Description: homolog of Medicago truncatula MTN3 (MTN3); INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: MtN3/saliva-related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), RAG1-activating protein-1-related (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: Nodulin MtN3 family protein (TAIR:AT3G48740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G24550.1

Model type: Protein coding
Short Description: beta glucosidase 32
Computational Description: beta glucosidase 32 (BGLU32); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 31 (TAIR:AT5G24540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR