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52-1070-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20736584 [Map]; Strand: w
      • AT3G55880.2 - [+] show detail - Alpha/beta hydrolase related protein
        Distance: 0; Region: exon1 (5UTR)
      • AT3G55880.1 - [+] show detail - Alpha/beta hydrolase related protein
        Distance: -7; Region: promoter
    Flanking Genome Sequence: 52-1070-1 - 5-prime edge 
    TCAGCTATAT CGTCAGCATC GTCAAATTTT TGTTTTCGAC GACCCTTTTA 
    AAACCCTCAA AAATAAGTCT CTACCAAAAA ACCTCTCTCT CCAGAAACCA 
    AATCACACTT ACATCATAAA TCCTCTGTAC ATAACCCAAA AAAAACCCTA 
    GAAACGAAGA AAGATCAAGA TGGGTTTGAT TAGCAAAGAA GAGATAAGCA 
    AAACAAGAAG ATATTCATCT TCTCTTTGGA GAGGTATCAA AACGATCTTT 
    GTTCTCTTCA CTATGTTTCT CTCTTTCATC ATCTTTTCTG CTCCGATCTT 
    CCTCGCCGTC GCCGACGCCG TCCTCCCCTC CGCAATCCTC TCATCCTCCT 
    CACCCTCCCT CAACCGCCTA TCTCCTTCTA GTTTTCCGGC GACGATTTAT 
    TCTTACCTCA GTAACTACGA TTTCCGTTAC TCTCTCATCG ACATACCTCT 
    CATCTCCATA ATTAGATCTG CCATTATACT ATGTAAGTAA ACTAGTAAAG 
    TAACACAGTA AATTATTTAA GGAAACTTAA CTTTGTTCTG TTTTTCTAAA 
    TATGGAAACT CTTTTAACTA CTCTGTTTTG TACTCTGTTC TTGNTTAAGT 
    TCGTATTTTT TTTGNAAAAA TTATAATTAT TTCAGATAAA ATTCAGCTCG 
    TGAAATAGCA TGNGCCTTAA ATTTCTGCTA GATTTTCGGG GGATTAATTT 
    NAATTTCCAA AG

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 20736515 [Map]; Strand: w
      • AT3G55880.2 - [+] show detail - Alpha/beta hydrolase related protein
        Distance: -56; Region: promoter
      • AT3G55880.1 - [+] show detail - Alpha/beta hydrolase related protein
        Distance: -76; Region: promoter
    Flanking Genome Sequence: 52-1070-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    GCTGATGTGT AATTTTTTAA CAAATAAATA ATATCTATCA TTGATAATGA 
    CTCTTTTTTT TTNCTNGTNG AATTTNANCA TTGGAAANGA NGTNGTTTNG 
    GNCGNCTTTN CCANGGAATA ATTATNCTAA ACCATAATNT NNNANCAGTT 
    GGATTTTGGG GGCNTNATNT ACCCTNATNG GAAATAANCC NCAANAGTTC 
    CAAANGTTTA AANNCATNCN GNNTTTCCCT TTGGTTAAGC CNNANNATTT 
    NCNGANCTTT NCTGGGTTNN CCGGAAAATT TTNNANCNTT GGGTTNATCG 
    GTTGGCAATA NGCCCGNANT AANCTTTTNA TTTTNATCNG NCCTNCNGGG 
    ANCAAANCNT TNNTNAANGA TTNTNATGGC AAATTNTCCN TNTTNGNCTN 
    CAAAAGTTTN GCCCTTNGCA CCCNTNAAAT NTTGGCTNCN NGGNCNCCNA 
    AANCAAATTT NGTTTCCNGG NCANCANTNA ANCTTTATCT CNTNNGNGAN 
    ANCTTANTCA NCAATCCATG TNCAGCNCTA GNCTCCCTAN AATAACGGGG 
    TNNCCTAAAT GGCGTCAAAC ACAGNNCCCN CTGGNCTTAT TNAATTTTNG 
    GCAAGGGGGA GGCCCATTCC CCCNCCCTAA ATCCCNTCCA GCCNNCTGGN 
    TTTGGNTTNA NCCAAATGGA NAACTTTGNN CAAAGAACCC CGGGTTTTAN 
    TTTGAACCAA AAAAAAAG

AT3G55880.1

Model type
Protein coding
Short Description
Alpha/beta hydrolase related protein
Curator Summary
A gain-of-function mutant of SUE4 exhibited improved low sulphur tolerance.
Computational Description
sulphate utilization efficiency 4 (SUE4); BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT2G40095.1); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G55880.2

Model type
Protein coding
Short Description
Alpha/beta hydrolase related protein
Curator Summary
A gain-of-function mutant of SUE4 exhibited improved low sulphur tolerance.
Computational Description
Alpha/beta hydrolase related protein; BEST Arabidopsis thaliana protein match is: Alpha/beta hydrolase related protein (TAIR:AT2G40095.1); Has 87 Blast hits to 87 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR