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52-1073-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40670 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -481; Region: promoter
    Flanking Genome Sequence: 52-1073-1 - 5-prime edge 
    GGCACATTTA TCCATGGGGT ACAAAAAAGC AAAGAGTAAT CTTCAAGGAA 
    TAATATAATA ACAACACGCA TCTACTAGAC CGCATATATA ATAGTAATAT 
    CCATCAAAGC TCTATTTTAT TCTTCAAATT CACTTATTGT AAGATAAAAA 
    CATAACGATA TTGATTTATA GTGACTAGTG AGTGACTAGT GAGTGAGTCC 
    GGGTAAATGT ATGTGGAAAG GCACACTTGA ACAACGTAGA AAATGTCTTT 
    ATGATGTGTA AAAGAGAGCT TAGCTTAACA AAAGTCTTTA GCGGCTGCAA 
    TAACCGTATC CACGGTGAGT CCAAATTTCC TGTAGAGCAC ATTGGCTGGT 
    GCACTTGCTC CAAAACTGTC TACACCGATG GCTTTTCTTT TGGAGCCAAC 
    CATCTTCTCC CACCCAAAGG TCGACCCTGC TTCAATGCTC ACTCTTGCTG 
    AAACCTCTCA AGGTAACACA CTTTCTTTGT ATTCTTCTCT TTGTTCATCA 
    AACAGCTCCC AACTCACCAA TGACACTACT CTCACTGCTT TTCTTTCTTC 
    TCTTAGCTTC TCTCCAGCCT TTGCAGCTAT CTCTAGCTCC GACCCTGTCC 
    CCATTAGGAT TACGTCTAGT TTTGTCACCT GTGGAGTTGT CTGAGATTAC 
    ATATNCCCCC TTCACCACTA CCTCGACCGA AGTTCCAGGT AGATGANGCA 
    GCTTTTGTCT GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 40554 [Map]; Strand: w
      • AT4G00110.1 - [+] show detail - UDP-D-glucuronate 4-epimerase 3
        Distance: -365; Region: promoter
    Flanking Genome Sequence: 52-1073-1 - 3-prime edge 
    AATGTGCCTT GGTATTAAGT TGCAAATTTG ATTTAATTAA TCCCTAAACA 
    TGTTACTAGT TAGAGTTTGC ACGTGACGAT CTTGGGCAGC ACCTAAACAT 
    GTATTTGTGT GCGTAATTTT GTAATAAGTA AGTGCATCGA GTTTGATGAA 
    TCAGTATTTG AATGATAATT CGATGACAGT ACATTTGTTG CCATAAGAAC 
    CCTAAAGTAA GATCCATAAG GATGATGAAA GCT

AT4G00110.1

Model type
Protein coding
Short Description
UDP-D-glucuronate 4-epimerase 3
Curator Summary
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational Description
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Link
InterPro Scan - TAIR