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Mutant Lines
52-1101-1

52-1101-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 9516678 [Map]; Strand: w
- AT1G27400.1 - [+] show detail - Ribosomal protein L22p/L17e family protein
  Distance: 0; Region: exon7 (CDS)
- AT1G27410.1 - [+] show detail - DNA repair metallo-beta-lactamase family protein
  Distance: -523; Region: promoter

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCA GCCGGAGACA CAGTTGGCAG CAAAGTCAAA 
GAAAGGAGCC TCATCTTAAG CTATAACATA GACAGTCTAT TTGTGCTCAC 
TTGTGTTACC CTTAATACTT TTTGTTAGCT TCTCTCTATA AGACCAATAC 
TCAATTTTTA AGTATGATGA TTATCGGTTT TTGGATTGCT GAAAGAATCT 
CTCTTTATCC TTGGTATTGA TAGATGAATA ACTCATAGTA AAATCTTGAA 
ATATGTTTTT AGAGATGGAT TAGTTAAGAC TTGTTAAATC GTCGCCCAGT 
TTGTTAATAA CGCTCATTAA TATAATGACC AATACATCGA CTACACAGTC 
TGATAAAACG GATGGATTAG TTTTGAACTC GAGAAAGTTC GAAATGTTAT 
GTTACGTAAG AGCAAGTAAC ACTTTCATTC GTTTGTAAAA CCCAAAACAG 
ACCCAATCAT AAATCATCAT AAACGGCCCA AAAGACGGAA GGAATCATCG 
TCACTAAGTG GGCAAACAAA AATGGTGAAA CTGCAAAACA CCTGCAATTT 
CAATTTTCAA GGAATCCGAA ATGGAGAGTG GTCTGATATC AGTGGATCGA 
TGGAGAAATG GAAGTCAAGC CTACTTCTTG ACTCATATGC ACTCCGATCA 
CACTCGTGGC CTCTCCGGCG GATGGTCCCA AGGTCCTCTC TACTGTTCCC 
GCACCACCGN CTNTCTATTT CCCTTCCGT

3 prime edge [+] show sequence

Chromosome: 1; Position: 9516671 [Map]; Strand: w
- AT1G27400.1 - [+] show detail - Ribosomal protein L22p/L17e family protein
  Distance: 0; Region: intron6 (CDS)
- AT1G27410.1 - [+] show detail - DNA repair metallo-beta-lactamase family protein
  Distance: -530; Region: promoter

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
GCAAGAACCC AACAAAAATT ATGTGAGATC AGTGATGAAG ATGAAATATA 
AGTATTTGAA GATATTCAGA GAGGCGTTGG GATCATTAAA TTACCTCTTT 
CTTCACAGGC TCTTCTTTCT CTGACAAAAT CAACTCAATG TGGCATGGGT 
TTGACATGTA AGCTGCATAA GATAGAATTA AATCGAGAGT CAGCACAATG 
TGAATGAAGA AACAAACGTT GTAAAAACAG TCGAATAGAA AAGAAGACAT 
ACGATTGATT CTTCCATGAG CACGATATGT CCTTCTCCTC TGTTTTGCTG 
CTTGGTTCAC TTGGATGTGA GAAATGAAAA GGGCATCGAC ATCCAAACCT 
TTGACCTGAT AACCAAATGG TTTACAAAAA GTTTTAGTAA CTAACTAAAA 
TCACCATGGC AACAAAACAA AAAGAGTCGT AAAACCAACC TCAGCATTGC 
TCTCAGCATT CTTGAGAAGA TCAAGAACGA ATTGAGCAGA TTTAGCAGGC 
CAGCGACCTT GTCCGTTCGA ATGCCTGTTC TTTGCCTGAG CGGTACGACC 
AACACCACGA CAGAAACGGG TGAAGGGGAT AGCTTGCTTG TGAGCTATGA 
CATCTTCCAA GTACCTTTTG GCCTTGTTCA ATGGTAGCTT CCTTATGGCG 
TGCGCTGTTT CTCTAGTGTT CTGTTTCATA CAAATTCAAT TCAAAACACA 
ATTAGACACA TTCAAAT

AT1G27400.1

Model type: Protein coding
Short Description: Ribosomal protein L22p/L17e family protein
Computational Description: Ribosomal protein L22p/L17e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, plasma membrane, chloroplast, vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L22/L17 (InterPro:IPR001063), Ribosomal protein L22/L17, eukaryotic/archaeal (InterPro:IPR005721), Ribosomal protein L22/L17, conserved site (InterPro:IPR018260); BEST Arabidopsis thaliana protein match is: Ribosomal protein L22p/L17e family protein (TAIR:AT1G67430.1); Has 2094 Blast hits to 2094 proteins in 650 species: Archae - 321; Bacteria - 492; Metazoa - 519; Fungi - 182; Plants - 156; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G27410.1

Model type: Protein coding
Short Description: DNA repair metallo-beta-lactamase family protein
Computational Description: DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: sterile alpha motif (SAM) domain-containing protein (TAIR:AT2G45700.1); Has 810 Blast hits to 798 proteins in 218 species: Archae - 6; Bacteria - 54; Metazoa - 272; Fungi - 214; Plants - 166; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link: InterPro Scan - TAIR