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52-1130-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6325948 [Map]; Strand: c
      • AT5G18940.1 - [+] show detail - Mo25 family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT5G18940.2 - [+] show detail - Mo25 family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-1130-1 - 5-prime edge
    CTCTTGAGGC GTTTTAGGCC TAGAGGGCTT GAAGAATGAG AAAGACATGA 
    GATCAGATTC GGATTCCGCT TTTATGATTC TGAGCTCAGA GACGGAATCG
    TGGATCGGAT GAAACTCATT CAATAGCTAT ACGAAAACAA GAGAAAGGGT
    AACACATCCT TTCGCTTCCT CTTGTTCAAG CAGATCGTCA AATCATAGGC
    ACATTATTGT TTTTTCTAAT TACGATTTTG TGACAAATTT TGACCAAACG
    AAAAATGGAT AAATACCATT AACTTTAAAA GTTTATGCAA GCAAACAAAC
    TTTATAACTG TAGTTCCCAA CTTCTAATCA TATCTAAATC AATTGTGAAA
    TTTTTAGTCC AAGAGGATTA TAGATATATG TTATCCTGTT GTAATATTTA
    GGATAGTACA AATTTGGGGA ATGACAAAAA AAATTAACTG TTTGTATTAC
    CAAAAATTCA TAATTTGGGG AAACTCAACT CATTACCTCT TATGGACCAA
    AAAATAGAAT TAATCTTGTT AAAAGCAGTG TTGTTTTGTT CGCTTTAAGC
    TAGAGATCCA GTATGGACGC AACGTGTATA TCTATCTTTT ATTCAATTCA
    ATGTTGGCCC AACAAGGCCC AACTATATGT GTCATTACGA AAATATAAGA
    CCTTCTTTTC TCGTATACCA AACCGTTAAC CTTCTTTTTT TTTTCCCTTT
    TTAACCGGTN
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6326064 [Map]; Strand: c
      • AT5G18940.1 - [+] show detail - Mo25 family protein
        Distance: 0; Region: exon1 (CDS)
      • AT5G18940.2 - [+] show detail - Mo25 family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1130-1 - 3-prime edge
    CTCAAGAGGT TGTTAAAGCC ATCAGAGACA GTCTTATGGC TCTCGACACC 
    AAGACCGTCG TCGAAGTTAA AGCCCTCGAG AAGGTTCTCT CTTTATTCTC
    TACCAAAAAG TTTGTACCTT TATGCCTAAC TTCTTAATTT TCGAAATGGG
    TTTTACTCAT TTGTTTGATT GATGTTTGCT TGTAGCTTAA ATTTTGAGTT
    TTGGTTATAT GGGATTCTGG CAAATCTGAT TTTTTTTAAT TGAAGAATT

AT5G18940.1

Model type
Protein coding
Short Description
Mo25 family protein
Computational Description
Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G18940.2

Model type
Protein coding
Short Description
Mo25 family protein
Computational Description
Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 565 Blast hits to 563 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 217; Fungi - 137; Plants - 151; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link
InterPro Scan - TAIR