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52-1137-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24426965 [Map]; Strand: c
      • AT1G65680.1 - [+] show detail - expansin B2
        Distance: -301; Region: promoter
    Flanking Genome Sequence: 52-1137-1 - 5-prime edge 
    ATCATACGGT GTCGTATAGC ATATTAATTC TTATTTTTCC CTAAATCAAG 
    GTAATTTGGA ATTAGATTGA TGGCGAAATT TGTACGCTAA TGTAACCGTT 
    AATGGTGGAT TACTTTGGTC GTTGAAATTT AATCGCACGG TTGAAAACAT 
    GCATAAAGTT CTGAAAATAA TCGCATGAAC GTAAAACTTG GCGTAAATCA 
    GGTTTGTCAT GACGATTTAC TGAATCAATT TTACTTATTT TATAACAAAC 
    TTAAAACGTG AAGGAAGGTC CCATGAATTA ATTAATTTTG TATATGAGTT 
    GAAGAGTTCA AATATCTTTT AGAAAAATGT TATACTATAA ACTTAATTTT 
    TATTAGATTC ATGATGATGC ACATCCGGCC CACACGATAC TGTATATGTA 
    TAGTAATATA TCAATGATAT ATATCTGCTC TGTGCCCATA AGCCCATTGA 
    AGAAGAGTTG CCAATCAAGC CTANTNGAGC NCAACCAACC GTTGGAATAC 
    CAGCCNGGCC GNNACNCNGN NCCNNTTTAA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24427081 [Map]; Strand: c
      • AT1G65680.1 - [+] show detail - expansin B2
        Distance: -185; Region: promoter
    Flanking Genome Sequence: 52-1137-1 - 3-prime edge 
    CGTATGATGC AACCAGATAT AAACTATGGC TCTAACGGTT AACCGTAATT 
    AGGATTCACT TCGAAATAAA ACTAAACAAA AAACGAAAGA CTTCAAGTGT 
    CTTATAGTAT TTTTTTAGAC AAAGTTAACA CGTGGATTAA TACAGTTGGG 
    CGTATTAGAG TCTTTCACGG GATTTGATCA ATCTATAAAC TACTATAAGT 
    AGCCCATCTT ACCTTACTTA ATATTATCAT TTATCACAAT GACAATTCTT 
    GTCGTAGATC GATATTACAT GCTCATGAAC TTACTCTTTG CTCTAACTTG 
    TCTCCTCTTG AACTTAACTC ATTGCTTTAG CCCCAAGAAA TTCAACATTT 
    CAGCCGCCAC GACCAGCGAT TCTGATTGGT CTATCGCCGG ATCTACGTGG 
    TATGGTAACC CCACCGGATA CGGAAGCGAC GGTATATATA TATTCGTGTT 
    ATGTCAATTA CAGCTCTAGA TAAACAAGCA AGAAACTAAC TATATATTTA 
    AATTAATTAC TAACCACAAT ATATTGATTA ATTATAATGA AGGTGGAGCT 
    TGTGGTTATG GAAATGCTGT TGCACAACCT CCGTTTTCGA AAATGGTATC 
    AGCCGGAGGT CCGTCGTTGT TCAAGTCAGG AAAAGGATGT GGTGCATGTT 
    ACCAGGTTAC TAATATAATT ACAATATTAA GCGGAAGAGA TTAAGAATAA 
    TGAAAGATTA GCTTATATAC TGATTTATTA CGTTCAG

AT1G65680.1

Model type
Protein coding
Short Description
expansin B2
Curator Summary
member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Computational Description
expansin B2 (EXPB2); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B4 (TAIR:AT2G45110.1); Has 2190 Blast hits to 2184 proteins in 158 species: Archae - 0; Bacteria - 20; Metazoa - 0; Fungi - 26; Plants - 2110; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR