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Mutant Lines
52-1143-1

52-1143-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 13925 [Map]; Strand: w
  - AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
    Distance: -566; Region: promoter
  - AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
    Distance: 0; Region: exon1 (CDS)
  - AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
    Distance: -702; Region: promoter
Flanking Genome Sequence: 52-1143-1 - 5-prime edge
```
AACAGTTGTT CATCATAGAA AAGGCAGGCT TGTTTGGGAC GACCGCCGGA 
GACGTTTTGC AGGTGATCGA TGTGAATAAA CGGATC
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 13847 [Map]; Strand: w
- AT4G00026.1 - [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unk...
  Distance: -488; Region: promoter
- AT4G00030.1 - [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
  Distance: 0; Region: exon1 (CDS)
- AT4G00040.1 - [+] show detail - Chalcone and stilbene synthase family protein
  Distance: -780; Region: promoter

TTAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCTT 
CTCCGTCGTC CACAAGAGCC GCCACGTAGC AGATAGAGAG TCGTCTGTGG 
TGATGGAGCT GCGCCCGATA ACCGTCATGG ATTCGATGGC GTTCACGATT 
TCATCTCGCT TCTTGGGGTC TTTCTGGGTT CTCAGACCTC GATCCTCCTC 
GGAGATCAGC TCAAGCAGCT TCCTCTTGGC TCGCTGTGCT GGATTCGCGA 
AGATCGAGCA GCTTGTTCGA AAACCGGCAC GACGAGTGCG GCGGAGTGGA 
GGAGAACATG CCGACAGCGA GAGCGCGAGC GCCATGTTTG CAAATTGCAA 
TTTCCATGGT TAGGTTGTTG CACGAAGAAG AAGAAGAGAT ACTCTGTTAT 
TTGGGTTTCT TTTCTAAAAA GCCCATTTGG GTTTTATTTG CTTTATCTCA 
TGAGTCTAAG CCCAAGCCCA AGGAAATAGC TTGCACGTGC GCGTCACGTG 
TCTACGATAA AACCCCAGCA ACGGCGAGCG GCTTTGCCTT GCTCATTCAA 
CCTCGCTCGT CGTCGTCGTC GTCTCCACTT CGATTTTTCA ATCAGTAATA 
TTGGTGGTTC AGAGATGATG ATGATGAATC TTTTAAGGAG ATCAGCGATA 
GCCATCGGCC GCCAATCAAA ATCGAAACTG GCGTCGTTTT CCTNCGCTAC 
ACAACCTTGT TCCGGAATCC CAAAATCGGT AAGGCTTTCG TATTNCATCT 
CACTCTGNCG GCATTTCTAT ATAATATTG

AT4G00026.1

Model type: Protein coding
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim21 (InterPro:IPR013261); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00030.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); Has 184 Blast hits to 184 proteins in 36 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00040.1

Model type: Protein coding
Short Description: Chalcone and stilbene synthase family protein
Computational Description: Chalcone and stilbene synthase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: phenylpropanoid biosynthetic process, biosynthetic process, metabolic process; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Thiolase-like, subgroup (InterPro:IPR016038), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT1G02050.1); Has 5683 Blast hits to 5679 proteins in 1391 species: Archae - 0; Bacteria - 1882; Metazoa - 0; Fungi - 67; Plants - 3528; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).
Link: InterPro Scan - TAIR