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Mutant Lines
52-1168-1

52-1168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 3612553 [Map]; Strand: w
  - AT5G11320.1 - [+] show detail - Flavin-binding monooxygenase family protein
    Distance: 0; Region: exon2 (CDS)
  - AT5G11320.2 - [+] show detail - Flavin-binding monooxygenase family protein
    Distance: 0; Region: exon2 (CDS)
Flanking Genome Sequence: 52-1168-1 - 5-prime edge
```
GGTCCGGTCT TAGGTCGTCG AAGGCCTAAA AGGTCGGTAT TGCCCAACGT 
AGAATTAGCA AGAAGTAGGA GAAATTTGTC CACCAGCTTT AGAGGAAACC 
ATTTCAGTAG TGTCATGGCT ATTCCAAATG TTGATAGACC AAAAAAGTCT 
CTTGGTAATA CATGTACCTG CGTCATTAAT TAGACCCGGT TACTACTTAT 
ATTAACAAAA GCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 3612484 [Map]; Strand: w
- AT5G11320.1 - [+] show detail - Flavin-binding monooxygenase family protein
  Distance: 0; Region: exon2 (CDS)
- AT5G11320.2 - [+] show detail - Flavin-binding monooxygenase family protein
  Distance: 0; Region: exon2 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GGACCAATTG AGCTAAAGAA CGTCACCGGT AAAACTCCCG TTCTTGATGT 
CGGTGCCATT TCTTTAATCC GATCAGGACA AATTAAAGTA AGTTCATAAA 
TTTTCTTCTT CTTAAAGTAA TACTAACCAT CTAGAGTAAA TTACCTTTTT 
AGCTAAAAGG TTAGATATAT GAAAAGTTTG CATGCGTGCG TTTGTACTTG 
AACTGATTTG TCTTGTGGGT ATTAACTATT AGGTGACGCA AGCCGTGAAA 
GAAATAACGA GGAACGGGGC AAAGTTTCTG AATGGGAAAG AAATTGAATT

AT5G11320.1

Model type: Protein coding
Short Description: Flavin-binding monooxygenase family protein
Curator Summary: Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.
Computational Description: YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G11320.2

Model type: Protein coding
Short Description: Flavin-binding monooxygenase family protein
Curator Summary: Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.
Computational Description: YUCCA4 (YUC4); FUNCTIONS IN: NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: in 7 processes; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-binding monooxygenase family protein (TAIR:AT4G32540.1); Has 12265 Blast hits to 12250 proteins in 1811 species: Archae - 85; Bacteria - 7080; Metazoa - 781; Fungi - 1596; Plants - 658; Viruses - 0; Other Eukaryotes - 2065 (source: NCBI BLink).
Link: InterPro Scan - TAIR