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Mutant Lines
52-1173-1

52-1173-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 135487 [Map]; Strand: c
- AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: exon6 (3UTR)
- AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: exon5 (3UTR)
- AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
  Distance: 0; Region: exon5 (3UTR)

CTGACAAATG GCTGCATTCT TGTCATGTCA GCCACCCTGA TTTCCTCTTC 
TTCTGCCGTC GTTGAGTAGG GTATGAAGTT GTGACGCACT TTGAGAGAGT 
TTCAAAAAGA AACTCAAAAC TTGTTGATAT GGAGGGTTGT TGTCAGATTC 
AGGTTTAAAA ACGAGTTGAT TTTTATGTTT GTAAGTTATA GATAAAACGA 
ATTTTGTTTG GTCAGATAAT GTATGTGAAC CGTGGGCTTA CCTCGTGTTG 
TTGTATACCT ATACCATGTT GTCTTGCAAT AGAAACTTTT GGAGTAAAAA 
TGTGAATGTT CAATCTAGCA GTAGCATACT TACGGTTATT TTCGAATATT 
TTTAATATTT ATATATATTT TTAATTATTT AATCTAAAAA TAAATAATAT 
TTTGAAAATA TATTTATATT TCGGATATTT TTGGCTATCC GAAATATTTT 
GATACGTAGC CATTCGGTTT CGATTTTTCG GTTATAGAAT TTGGGACATG 
CTAATGTCTG GTTAAAGAGT AACCACAGAT TGCCATATCT CATATGTTCT 
CTCCATGAGA AAGTTCACTT TGGCTGCATG ACCTTCCCTT AGGCTATATA 
TCCCAAACAG CTATAATAAT TTCGCTCGAA ACCTTTAATC TTTTTTAAAA 
AACTCAATAA CCTTGGCGTT CGGTTATCCA TTCGGTTTTA GTATATAT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 135603 [Map]; Strand: c
  - AT2G01260.1 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: exon6 (CDS)
  - AT2G01260.2 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: exon5 (3UTR)
  - AT2G01260.3 - [+] show detail - Protein of unknown function (DUF789)
    Distance: 0; Region: exon5 (3UTR)
Flanking Genome Sequence: 52-1173-1 - 3-prime edge
```
TTTGTCAGCG GCTTGGAACA GAGATTTCAC GAGCTGGTGC TCCGAACCCC 
CAATGGGTGT CCATAATGAA CCTCTGAACT TGTATGAAGC AAGCCCAAAC 
ACAGGCAATG ACATCTTCTC GCTCTCCCTT GGTTGCAGTA AGGCTCATTG 
ATTGTTCACT GCCTTCACCT ACAACAGCCA AACGTTGTCA ATAGTTCTAT 
CTACCAAACT ATTATCCTAC AAACAATTTG AATTACCACC NCGGGCCGNT 
ATNCANNCTT NCGCAACANA CCTATTTATG TTGTCATTGT GATTGATAGT 
CAAATGATGC TACTCTAGCC ACATGTCACT CTAATCAATT GGAACATTTT 
GGATC
```

AT2G01260.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 265 Blast hits to 263 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 263; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01260.2

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01260.3

Model type: Protein coding
Short Description: Protein of unknown function (DUF789)
Computational Description: Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G15030.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR