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52-1184-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2272056 [Map]; Strand: w
      • AT2G05920.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1184-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGA TGTGTACCAA TCGTGGTGAG TGAGGAATGA 
    TTCCGGTTTA TCGGAGTGAT TGACGCGGAT GATGTAGGTT TTTTTGGCGG 
    TTGTGTGGAG GAAAAGGAAG AGGAAGGTGG TGATGATTGT GATGGAGGAA 
    GAAGAAGAAG AAGAAGCCAT GAGTGTGTGT GAATGATGGT GAAGTAGAGA 
    AGAAGAGAGT GTGGGGATTG GGGAATAAGA AGAAGAAGAA GAAGATAGGG 
    AGAGAGAGAG AAAGAGTGAT GGGATTAAAA TAATAATAAA AAAAAGTGGT 
    GGACACGTAA GGGACGTGTG ACCGTTAGAA TAATAACGGA AATGCCATCG 
    TCGGTGGGGT TTTGAAAAAG AGTGTGTGTG GGAAATATAT ATACAGCTGG 
    AGACACGATA CGTGATAAAA GGGTTGTTCT TCAGTCTCTC AGGCCCATTT 
    TTCTTTTTAT TGGTTTCCTC AAACGTTCTT TTGTGTCTTT TTCTTTCTTT 
    TTTCAACGTT CTTTTTGTGT CTTTTTATTT TATTTTATTA TATGTTTATA 
    AACATATAGA TTGTTTTTTT AATAATTGTG TTTGGGTGGA TGATGTTGGG 
    TTTAANAATT TATAAAATTG NTGATGANTT TGTTGAAAAC TAAANATCAT 
    TTANGGGTAN CTAATAAANN NGNNGGNCTG TTTTTTAGAA TTAAAATCNT 
    TTNANGGGNN NCNNCTNNNA ATTAANGGAA A

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2272043 [Map]; Strand: w
      • AT2G05920.1 - [+] show detail - Subtilase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1184-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAACTC 
    AATTCAGAAT CATCTCTTCT CTACACTTAC ACAACCTCCT TCCATGGCTT 
    CTCCGCTTAC CTCGACTCCA CCGAAGCCGA TTCTCTCCTC TCCTCCTCAA 
    ACTCAATCCT CGATATCTTC GAAGATCCTC TCTACACACT TCACACTACG 
    CAGTACTCCT GAGTTTCTCG GTCTCAATTC CGAATT

AT2G05920.1

Model type
Protein coding
Short Description
Subtilase family protein
Computational Description
Subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT5G67360.1); Has 7371 Blast hits to 6472 proteins in 1023 species: Archae - 222; Bacteria - 3849; Metazoa - 147; Fungi - 727; Plants - 1890; Viruses - 0; Other Eukaryotes - 536 (source: NCBI BLink).
Link
InterPro Scan - TAIR