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52-1194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9402387 [Map]; Strand: w
      • AT5G26751.1 - [+] show detail - shaggy-related kinase 11
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-1194-1 - 5-prime edge 
    TTAAAGAGAG AGAGATCCGT ACGAGTAAGG ATTTGTGGGT TTTAACAAAA 
    AAAAAAAANG GGTTTGGGGG NTTNNAAAAN NNAAAACCNN NNNNNNANCN 
    TTTTTTTTTT TNCCGGGGNN NANCNAANTN NAAAAATTTT TNCCNTTTTT 
    TTTTTTNGGG NNTCCCNTNN NAANNNNNNN NTTTTNNNAN CGGGNNTNNN 
    GGNNAANCNA TTTTTTTTTT CCCTTTTNGG AAAAAAAAAA AAANNAAANN 
    TTTTTTTTTT NGGGGGGGGG GGNAAAAAAA NNNAANNTTT NNNGGGGNNA 
    NGGGNNNTTT TTTTTNNNNN CNAAAAAAAA AAAANTNGGG NCCCCCCCAA 
    ANTTNAAAAA NCCCCCNGGG NTNGGGNCCC CTTTTTNNNA ANTNCCCCCN 
    NCNNCCTTTT TTTTTTTTNN CCCCCCCCCC CCCCCCCAAA AAAANAAANN 
    NNTTNAAAAA NNNNNCNNAA AAACNTTTTT TTTTGGGNNT TTGGGNNCCN 
    AAAAGGNTTT NCCCNNNTTN NGGGGCCNNA ANCCNTNNCC NAAAANGGGN 
    AANCCNCCCC CAAAANTTTN NAAAAAAATT GGGAAAAAAA CCGNNNNGGA 
    NCCTTTTAAA AAAAGTTTTG GNANNCNGNA AANTTAAAAC CCGNGNNTTT 
    NAAAAAATTT TNNCCCGTTT TTTAAAATTT NCCCCCCCNN CCCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9402271 [Map]; Strand: w
      • AT5G26751.1 - [+] show detail - shaggy-related kinase 11
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 52-1194-1 - 3-prime edge 
    CTCTTTAATA TCCTAATTCT TCTCTTCATC GATCTGAGAT TTTTACGTTT 
    TCATCGGTAC GTCTTAAAGA TCTCTCTCTT TCTTCATCCC TTCTTCTGGG 
    TTTTAGCTTC AGATCTGCTT CACCATGAAT TTTAATTTAA CCCATCATTT 
    TAAAATCGAC AGATTCTCTC TTCTCTACCA AACTCTAATT TGGTTTTAAT 
    GTTTGGGTCT TTTAAATTTT GCAACTTTTT TTGGGCTTAT CATTATTTTT 
    TTTGTTCCCG TTAAAAAAAA ACTTTCCTTT TCGTAATTTT AGNGTTCTAA 
    ATNGTTTTTT ACTTATTTGA AGNGTTCAAT TGTTAAGCTN CCANCCCGGG 
    CCGNANACCN CNCNGGCCCC CTATNGCTTN GGGTCTTTTA ACAAGGAAAC 
    ACTACTTCGG CTGCTAAGAT CNGGNGGCGG ATNAAGCTCT AATACTCAAT 
    NNTNCACATG ACATAAAGTC ATATNGNGCT CCAAAACNCN NGCCAANCTN 
    CCACTCGNGN NCCNAAAGCT ACCACCCNNG GGCCGNNNAC CNCNCGG

AT5G26751.1

Model type
Protein coding
Short Description
shaggy-related kinase 11
Curator Summary
encodes a SHAGGY-related kinase involved in meristem organization.
Computational Description
shaggy-related kinase 11 (SK 11); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity; INVOLVED IN: meristem structural organization, phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: inflorescence meristem, whole plant, cultured cell; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G05840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR