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52-1205-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9833890 [Map]; Strand: c
      • AT4G17670.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 52-1205-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAA AAGAAAAGCT AGTTAATGGA TTTATGGGTT 
    TTTTTCTTCA TCTAAAGATC TTTCTTTAGT TTGAATTTGA ATACTAAACC 
    AAAAAAAAAA GGGTTGGGGA AAAANAAAAA AAAAAAAANC NNAAAANCCC 
    CNNTTTTTTN AAGGGGGNGG CCCCTTTTTN NNTTTTTTTN NNNNNTTNNN 
    ANTTTNNNTT TTTTNNNAAA AAAANNTTTT TTNCCCNTTT GGGGNCCNAA 
    AAAACNTNGN CCNAANCCNT TTNNGNAANT GGGNAAANCT TTTTTTTTTT 
    TTTTTNGGGN AAAAAAAANT TNNNNNTTTT NAAAANNNNN NNCCCCCNNG 
    GGNTTTTTTT TTTNGNNANN GGGGGGNNNN NAAAAAAANG CCCNAANNNN 
    TTTTTNNNGG NAAAAAAAAA NNCCCCCCTT TTTTNAAAAA TNNNNNTNGG 
    GNAANNNAAA NGGGGGGNAA AAATTTTNNN NNCNAAAAAA NTNGGGGGGN 
    NNNANGGGGN NNNNNNNNTT TTTNGGGGGG GGGGNNGGGN CCCCCCCCCC 
    AAAAAAAANT TTNGGGGGGT TTNAAAAAAN CNTTTTTTNC NNCCNNNNTT 
    TTTNNNTNNT TTTTNGGANA NNNNCNTTTT TTTNNTTTTT TTTTAAAAAA 
    ANNAAAAAAT TTTTTTTTCC NNAAACCCTT TTTAAAAAAT TNCCAGGGGG 
    NGGCCNCCCN TNNTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9833915 [Map]; Strand: c
      • AT4G17670.1 - [+] show detail - Protein of unknown function (DUF581)
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 52-1205-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGTCTATCTC CCTTTTTTTC CTTTATAACT TTAAATTAGG CAGCAGCAAC 
    AGTTCCAGTG CGGAAAGCAT AGTCACGAGA TCTAGTTGGA GAAGAAGAAG 
    AGCTTCGCTT TTCATTTCTT CTCATAGCTT TCACAGATGT AGACAGACTC 
    TGTTTCTTCT CTTTTGCTTC GTCTCTTTCT ATCTGTTCTT CTCTACACTC 
    TTCACTACAG AACGGTGTGT CTCCTCTGTT TTAACACAAA CATTTGAAAT 
    CATCAGACAC AAATTATATA GATCATACAC GATTCTTAAT CCACAAGGCA 
    AATCAGAATT AGGGTTTCTT CTTTTGTTGA CTAAAATATC AAAACTTTAT 
    TAAGCAAACC AAAACCTAAT CGTTACAGTA ATCAAATTTC TTAGCTTACA 
    TAGCAAATGA TAATCTGGGT ATGTTTCAAA AAGAAAATAA GATCTAGAAC 
    AAAGGAAGTA CCTGTACATG AAGATGTCTC TGTTATCACC AAGACGTTTC 
    TTGCAGAGGA AGCAAGAGTC CAAGAAATGA GGCTGTCCAT AACCGTAATA 
    GCTATTGTCG AATCTAAAAT CATGAAATTT TCCAGATCTG GGAGATGAAA 
    CAGAGTACTG ATGATGATGA TGGTTATAAT AATAACTCTG AGGATAGTTG 
    TAACAAGAAG GACTTGAAAC TCCAGCTTCC ATCTCAGATA AAGAAACAAA 
    ACCATCGTCT TCTTCTT

AT4G17670.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF581)
Computational Description
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT5G47060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR