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Mutant Lines
52-1221-1

52-1221-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 68159 [Map]; Strand: c
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 2680; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 1114; Region: intergenic

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATTGTGA TGAAGGGTGC CTTGAGACGA GAGAAAAGAA CATGTTTTCA 
CCACTTTACT TACTTCACCC TCACGAAGTT AACACACACA TATATATTAT 
TCCAACATAC CTAATATTAT ATTAATATAT CATGAAACTT GAAAATGTGT 
TGGTGTATTT GTATGTCATC CATTTTTTTT TTNTAATTNA ANGTTAAAAT 
TTATTAAAAA ANCGTNTTTN CAAATNAGTC CAANCNTTTT AAAACAGNCN 
AAAAANAAAT NTTATCTTNT TTNTNGGCTN GCAAACCTAN CTGGGANGCC 
ACTCGCNTNC TTNAANGCTC CTCCACTTTN GATCGGGCAA NCCANGCTTC 
CANCCNGGGC CGNAANCCNC CCNGCCCCTA NAAAANAANT NTNNNTTGGG 
GNCANNTNTT TAACCGNNTT TNAAANCNTA NAGGGCTCCN NATNNTGNNG 
GCNTNNNTNN GGNNNCCNNG NNNGANNACN CNAGNCNNNN NACNNATNNG 
GNCTTGGNCC NACCNTNAAN NTNACTTNGG GGCNNGNNAA CCGCCTTNNN 
NNNNANG

3 prime edge [+] show sequence

Chromosome: 4; Position: 68256 [Map]; Strand: c
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 2777; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 1017; Region: intergenic

ATAGTTAGGA GAAAATTTAC ATTATTATAC AACCTTTATA AAATGAAGAA 
GATTTCAGCT AATTTGTTCT CCTAAATCGG GGTTTGTATG ATGAACAGAA 
TCGTGCTTTG CCATAATTAG AGGAAGAAAC AAAAAAGTCA GCTAAATATA 
TTAATCTTGT CAAACAATAA TTTATATTGA AGGATGACGT GTTAGAGTTT 
GTATGCATGT AACCATATAT AAATGATTGC GTCGTTCATT TTGTATTAGA 
TTTTAGGATA ATGATTAGTT AGATTAGACA AAAATTGATC AATTATTATT 
AGGAGATCAC ATGGGACTGA TAAGGATAAA GAAAAACAGA GAAGATTTCT 
TCATCTCATT AGAGCCAAAG TAATAATAAT TATGATTAAA AAAACCAACC 
AAGATCGGCG GGAAGTAATT AACAATTACC ACAATATAAA GTTGGTAAAG 
GAATTTTCGT ATTTCTTAAA TCATATACAT TTCTTTAAAC ATAATTTAAC 
TCTCATTTGA TCATTGACAA CACATTATTA TGATAGTTTT GCTCGTGGCA 
ACTAGGATGA GAATT

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR