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52-1256-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15065599 [Map]; Strand: c
      • AT2G35880.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 52-1256-1 - 5-prime edge 
    GTCTTAGTTT CGACTTGTTT GGTTGATTCT ACTTGTCTTG TTTCAGATTT 
    AGATTTTGAC TAGTGGGTTT GCTTTAGTTG TTGTCTACAG GAACAATGGT 
    TTGGTTCAAT CTGTTTTCAA AATCAGAGCT TTCGAATTTT AAACATTAAA 
    ACGGTTGGTT TGTTTTTATG AATATGGTGA TAGGTGATGA CTAGGTTGAT 
    GATCGTAGCG TTTTGTTGCA AATAATAAAA GTGATTGTTG ACATTGCTAT 
    GTTACAATGT TTAGTCCTTA GGATCAGATG GAACAAATGG GTGGCTACTC 
    AAAACAACAA GGTCCATTTT TAGTTTGATT AAGGGATTTG GATCTGAGCT 
    TACTTCATCA ACTTTGTCGG AATATACATT TGCTTTGTGT GGATTTGGAA 
    GTTGTCCCTG AATGGCGTCC GAGGATTTGA ATATTGTTGC GGAATCAAAG 
    AAAGGGGAAG AGAATGTTAT TGTTGATAAT TCCAAGGACA TGAATAGACC 
    TGAGAATCTT GACTTATCTA CTGAGAAAAC TGATACTGCC AATGAGAATG 
    GTCCAAAAGA TGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15065678 [Map]; Strand: c
      • AT2G35880.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: 52-1256-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAAAGT 
    GAATGAAGAA AAGCAAAATT CCACAAAAAG TACCTTATCA GTCGATTAAG 
    AAAGACAAAG CAGTATATGC TTTTTCTCTA CTAAAAGCT

AT2G35880.1

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT4G32330.3); Has 16554 Blast hits to 10282 proteins in 807 species: Archae - 18; Bacteria - 1410; Metazoa - 6904; Fungi - 1967; Plants - 895; Viruses - 63; Other Eukaryotes - 5297 (source: NCBI BLink).
Link
InterPro Scan - TAIR