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Mutant Lines
52-1259-1

52-1259-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 6320017 [Map]; Strand: w
- AT5G18930.1 - [+] show detail - Adenosylmethionine decarboxylase family protein
  Distance: -6694; Region: intergenic
- AT5G18940.1 - [+] show detail - Mo25 family protein
  Distance: -5769; Region: intergenic

AACCCATCAT GTTAGCTTTT AAAAATGAGC TAGTGAAAGT CCTTGAAGCA 
ATGGATTTAA ACTTCGAAGA CATTGTATCA TACATGGCTC TAAAAGGTCA 
ACCACACATA GTTGTACCAC GTGACTCAAT TAAACCTTAC ATACCCTATT 
ATAATATAAT TAAACAAAGT CTACGATTTC TCTTTAAAAA ATGTCTGCGA 
CACTAAAAAA GCAATTCTCC ACAAAATCTA TCTTCTTTTC TTCTCCCTTT 
TAAAGCCGCG TGCCGAATTT TATCTGTTAG GTATTCTATC ATCCTCCTTA 
ATGTCTTAAC TCCAGTTAAG TCGAATAGAA ACTATTAAAG GAAAAAAAAA 
AAAAAAAATG GTTNGGTTNN NNTNAACCCT NANNNTNTTC CCANGNANTN 
NCNNNCCGGG NCGGNNANCN NCCGGGGCCC NTTAAANNNA

3 prime edge [+] show sequence

Chromosome: 5; Position: 6319901 [Map]; Strand: w
- AT5G18930.1 - [+] show detail - Adenosylmethionine decarboxylase family protein
  Distance: -6578; Region: intergenic
- AT5G18940.1 - [+] show detail - Mo25 family protein
  Distance: -5885; Region: intergenic

GATGGGTTTA CCCAAGACAA CCATAAACCT TTGATGCTAG AATAAAGTAA 
GCTACTTAAT TAAACCAAAA TAAAAATAAA AAATGTAAAC TACTTACGTA 
GAAAGCTATT TTTTTTACTC ACCACTATCA CCGAATTTAG GTTTTACATA 
TTGAACAACT ACTAGAAAAT TATACCGCGG ATTAGTTATT TTATATATTT 
TTGTTTTTTA TAAAATAAAT AATTTTTGTG TATAGTGTTT GTTGTTGGTT 
GTGTATGCTG TTTGTTGTTG GTTGTGTTGA TTAATAATTT TCGATAAGGT 
TCTGTACGAT TTTTAGTGAG TCGTAAATTT ACGATATTAA TAAAAAAAAT 
CTTCTAGGAT TTGATATGTG ATATACTACA TGATAATATT TTATTTTTTA 
TTCATAACTT TTTGTATTAT AATTATATAA TTTAAGTTTT CGCTATTTTT 
AGATTTAAAC TTGGTAGAAC ATATGTAATT TNAGTAGTTT TGTATTACAA 
TTATACATTT ANATGTGTAA AANAAGATTA ACACTTATTT TGATAATNTA 
ATATTGNTTT TTATTGGGGA TGGTTTATNT TCNATATCGN TTCAAAACTC 
GNCCNNTNCA AACTCCTCCC CTAAAATNCN GNTTNNTTCC CCCCCCATTT 
TGATNNTNTT AAACTTGGNN CATTTTAAAC TTNCTCCCNC CTNAAAACCN 
GGGCCNGGGA TAACTA

AT5G18930.1

Model type: Protein coding
Short Description: Adenosylmethionine decarboxylase family protein
Computational Description: BUSHY AND DWARF 2 (BUD2); FUNCTIONS IN: adenosylmethionine decarboxylase activity; INVOLVED IN: spermidine biosynthetic process, spermine biosynthetic process, polyamine biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: S-adenosylmethionine decarboxylase, core (InterPro:IPR016067), S-adenosylmethionine decarboxylase (InterPro:IPR001985), S-adenosylmethionine decarboxylase, conserved site (InterPro:IPR018166), S-adenosylmethionine decarboxylase subgroup (InterPro:IPR018167); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine decarboxylase (TAIR:AT3G02470.4); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G18940.1

Model type: Protein coding
Short Description: Mo25 family protein
Computational Description: Mo25 family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mo25-like (InterPro:IPR013878), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Mo25 family protein (TAIR:AT5G47540.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR