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Mutant Lines
52-1265-2

52-1265-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 10320079 [Map]; Strand: c
- AT5G28350.1 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
  Distance: -60; Region: promoter
- AT5G28350.2 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
  Distance: -126; Region: promoter

CAGATCAATA CACGGAGCAT CAAAATTGGA ATTGCCCGAC CGGTTTATGT 
TGATCGGATT TTAATTTTGC GAATATAATC GGTTTGGGTG CTACGAATCT 
AATTTTATGA ACAAACCGGG AATCAATTAT TGATTATCCT TGGTTCAAGG 
AGAACTCTCT CTCATTTCTC GGTTTACTCC ATTCTATAGA CTATTAATTT 
AATTCTATAG ACTATTAGTT TTCTCGCACT TAAGCTCTGG TTCGGACAGA 
AATATAAGCC GAACCCTGTA TTTCGCGATC TGCCGAACAG ATGCTCTACG 
GGGAGTAAGC CGAGCCCAGC ATCTCGCTCC CCAACTAATA TGCTGAGTCC 
GCCTCACTTA TTTTTTATAC AGAGCCCAGA ACTCCCTCTT TNAATTATAC 
ATANGGCCTA CTGGGCCTTA AGCCGANAGA CGTCTCGCGC CCANTNCACG 
CCCNAATACT TTTNTTTTTA AGCCGANCTN ANTCTNNCCC TAAAATTTAA 
CCCCAAAGAN AAAAAAAATC GGCTGGGACN NNAGGGGAAA ACCNNNCCNC 
CNAAAACCNN NCNNAAANCT GGNNANGGGT TNNANTTANN NNNTTTAAAA 
CCNANTTNNN NANGGGAATC CNNNTTGNNA NNCCNNNNCN CCNC

3 prime edge [+] show sequence

Chromosome: 5; Position: 10320169 [Map]; Strand: w
- AT5G28350.1 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
  Distance: 0; Region: exon1 (5UTR)
- AT5G28350.2 - [+] show detail - Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotid...
  Distance: -36; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT GCAGATCAAT ACACGGAGCA TCAAAATTGG 
AATTGCCCGA CCGGTTTATG TTGATCGGAT TTTAATTTTG CGAATATAAT 
CGGTTTGGGT GCTACGAATC TAATTTTATG AACAAACCGG GAATCAATTA 
TTGATTATCC TTGGTTCAAG GAGAACTCTC TCTCATTTCT CGGTTTACTC 
CATTCTATAG ACTATTAATT TAATTCTATA GACTATTAGT TTTCTCGCAC 
TTAAGCTCTG GTTCGGACAG AAATATAAGC CGAACCCTGT ATTTCGCGAT 
CTGCCGAACA GATGCTCTAC GGGGAGTAAG CCGAGCCCAG CATCTCGCTC 
CCCAACTAAT ATGCTGAGTC CGCCTCACTT ATTTTTTATA CAGAGCCCAG 
AACTCCCTCT TTAAATTATA CATAGGCCTA CTGGGCATAA GCCGAGAGAC 
GTCTCGCGCC CAGTACACGC CGAATACTTT TATTTATAAA GCCGAGCTCA 
GTCTCGCACT TAACATCTAA CCCGAAAGAC AGAAAAAATC GGCTGTGACG 
TCAGGTGAAA ACCAGTCCGC CCGAAAGCCG AGCTCAAAGC TTNNATAGGN 
GAGNNGAAGG CTGGNNGGGG NTTTNGGANT GAANTTTANC NNNGAGGANN 
NNNNNTNNAN GGNNNTTAAN ACCTNGNNCG GNNNCNGNNC NTTTANGNCN 
TAATANCNGT NNCNTNNGGN AANNACNAAA G

AT5G28350.1

Model type: Protein coding
Short Description: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Computational Description: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G28350.2

Model type: Protein coding
Short Description: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor
Computational Description: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosome control protein 1 (InterPro:IPR009771), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Quinoprotein amine dehydrogenase, beta chain-like (InterPro:IPR011044); BEST Arabidopsis thaliana protein match is: Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor (TAIR:AT3G61480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR