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Mutant Lines
52-1270-1

52-1270-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 14905627 [Map]; Strand: w
- AT4G30510.1 - [+] show detail - homolog of yeast autophagy 18 (ATG18) B
  Distance: 0; Region: intron9 (CDS)
- AT4G30510.2 - [+] show detail - homolog of yeast autophagy 18 (ATG18) B
  Distance: 0; Region: exon9 (3UTR)

GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATATAA CCTGATAGGT CATTAGCAGC GTCTAAAAGA 
ATTAACTTTC ACCTTCTAAT CCCGGAAGAA ACTGCGTTTT GAAGCACATG 
ATGATGAGCT GGATCTAGTG CATCACTCAC ACTGTCGGGA AGAACCGATC 
CAAGAAAGCT AGTAGACCTT TTGCTTCTGA AAAACTCTTA CAAATGTTAG 
GAATCACAGT ATGTATAAGG GAAGTAAGAG TGTGATTCTT AATCCTAACC 
TTTGGTTTAT GGCCAAACTT AAAGAGAAGG CATGAATGGA GCCTGAAGAA 
CTAGTTGCAA TTAGTATATC TGGAAGCTGT GTCGATGGTC CAAAAGACAG 
TGAATATATA GTAGATGGGT ATGTTCCTCT CCTGAAACTA TATGACTGCA 
AACAGAGGAA AGAAACGATT AAGAATCTGT AGAAAAACAA AATGGTGATG 
TATTAAAAGA GCAAACTATT CACCTTAGTT GCTTCTGAAA CAAGATGGAC 
TCGGATCAAG GTTCCTTGCT CAGATGCTGT AGCAATGTAC ATTCCATTTG 
AAGACAGTGC AATCGCAGCC AATGGAGAAC GATGTGCATC AATCTGTAAT 
CGAGTTTAAC AAACAGAGAG ACAATACAAT CAAGTTCATT AATAACTTAG 
TTTTCTATGC AAATTAGAAA TTTAAACCAA AAATCAGGTG AAGCATCTAG 
TAAACCTCAC TATGAGACTG C

3 prime edge [+] show sequence

Chromosome: 4; Position: 14905618 [Map]; Strand: w
- AT4G30510.1 - [+] show detail - homolog of yeast autophagy 18 (ATG18) B
  Distance: 0; Region: intron9 (CDS)
- AT4G30510.2 - [+] show detail - homolog of yeast autophagy 18 (ATG18) B
  Distance: 0; Region: exon9 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTCCCCAAGA GGTTTATTGT CTGTCTCTTG CTTGTGTGTA CAGTTATGCC 
GTGGTTAGGA AGATAGACAA ACTTGAAGGA ACATCATCTC CATCTCATTT 
TACATCTCTT AGGTAAGATT TTAGGATATC TTCATTTTGA AACCATGGTT 
ACATGACAAG TTTTGATAAT CTTTTACCTT TCACGTTCTT TTCAGAGCAA 
CGGTATCGGT GATCACTTAT AACGGATATA TCCAGGAGTA TACGCTAAGT 
ATCAATAACA AGAATGAGTC TCTATGGACA CTGGAACGTG AATT

AT4G30510.1

Model type: Protein coding
Short Description: homolog of yeast autophagy 18 (ATG18) B
Computational Description: homolog of yeast autophagy 18 (ATG18) B (G18B); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.1); Has 1228 Blast hits to 1183 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 531; Fungi - 398; Plants - 152; Viruses - 2; Other Eukaryotes - 143 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G30510.2

Model type: Protein coding
Short Description: homolog of yeast autophagy 18 (ATG18) B
Computational Description: ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATATG18B); CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.3); Has 1236 Blast hits to 1191 proteins in 226 species: Archae - 0; Bacteria - 2; Metazoa - 531; Fungi - 404; Plants - 152; Viruses - 2; Other Eukaryotes - 145 (source: NCBI BLink).
Link: InterPro Scan - TAIR