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52-1280-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 6744007 [Map]; Strand: c
      • AT3G19450.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
        Distance: -591; Region: promoter
    Flanking Genome Sequence: 52-1280-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTTGATGAGT GTAGTTACCG AATAGTGTAT TCATATAATC TTTTAATGAG 
    CTTAAGATAT GATATTATTT CGACTAATCA GATAAGAGTA GTTAGATAAT 
    TTCGTAATAG AGCAACTCTT TCGCAAATAA AACCATTGTA AACATTACCA 
    ATTAGTTTTT TTTTTTTTNG GGCNNNNNCN AANANNNNGG NGGGNTTTTT 
    TTNANNAGGG GGGTTNAAAN NCNNNGGGNT TCCCGGNCCC CCCCCCNAAA 
    AAAAAAAAAA AANNTTTNNG CCCTTNGGGG NTTNNAAAAA AAANNAAAAN 
    NNNCCCCNAA AANNGGGGGG GGGNNNNTTT TTTNGGNNNN NNTTTTNNNT 
    TNTTTTTTTN GGGGNNNGGN NGGNGGGNNT TNNGGGGGGC CNAAAGGGNN 
    NANAAAAANC CNAAAAANNN NNGCCNAAAN TTNGGGGGGG GGNNNNNTTT 
    TTNNNNTCCC TTTNAANNNN NTTTTTTTTN NNNCCCNGNN CCCCANNNNG 
    NTTTNANNTN TTTTTTCGGG GGGGGGNNAA NTTTTTTTTT NNCNAANCCN 
    CTTNGGCCNC NTTTNNCCNT TTGGGGGGGG GGGGTTTTGC CCCCCNGGGG 
    AAAAAAAAAA AAANGGGGGG GGGGGGGNNC CCCCTCGGGG AAAAAAAAAA 
    NCCCCNCCCC CCAAATTNAA AANAAAANNC CCCCNTTTNC CCCCCNNTTT 
    NGGGGGGCNN CNAAANNTTT TNNNNTTNCC C

AT3G19450.1

Model type
Protein coding
Short Description
GroES-like zinc-binding alcohol dehydrogenase family protein
Curator Summary
Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.
Computational Description
ATCAD4; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: cinnamyl alcohol dehydrogenase 5 (TAIR:AT4G34230.1); Has 40533 Blast hits to 40509 proteins in 3018 species: Archae - 756; Bacteria - 27152; Metazoa - 1406; Fungi - 3053; Plants - 2651; Viruses - 3; Other Eukaryotes - 5512 (source: NCBI BLink).
Link
InterPro Scan - TAIR