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53-2023-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1570058 [Map]; Strand: w
      • AT4G03540.1 - [+] show detail - Uncharacterised protein family (UPF0497)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2023-1 - 3-prime edge 
    TGCAAGAGCC GCACCAAACG CTGCCAATCG CAGCACAAGC CCTCCTATTC 
    TCTTTGTCAA CTTCACCATC GAACGGTCAA TCGATTTAGT TTTCAACAGA 
    AATTTCTAGA TGAAACAGAA AAATATGTAA GAACACAAAG ACATCAGGGA 
    GAAGTGTAAG AACGTAACAC ATACACATAA ACTGAATAAA CAAACTAATT 
    GGTAATCAAC AATATATATA TATATATATA ATTGAGTGGG ATGTGCTGTT 
    ANCTGAGATT TTTCANCTAT CTTCACCGTC ATCGTCTNAT TTTCAACACA 
    CGACTATCTT TCTCTTTATG ACNTGTGGAA CTACAAAACA AAANTGCTTN 
    ATCAGANATA CAAANAGTAT TANATTTCAA CCGCACATAN TGTATATAGA 
    TACTCCAAAA TTGATGTCNT GGTAAAATTG ANGCCCTCAG AGTCNATATT 
    TTTAAAAAAT ATATGTCATA GTNNGGAATT AAAGATGAAG AGTNTGCATT 
    GNNGAAATAA CAANTGTCGN AGTNTATATT ATTANTGTNA GATTCATGAN 
    CGATGACATC ATNGGAGANA CAATTATCAT TTTTCGNTGA GCCGGTGTCC 
    TNACTTATAG GNGAATCTTN GGTGTTTTTG TCTGCCGGGC NTGTATATNA 
    ATTTTTTGNG ACATTTTTTC TTATATAANC ATAAGTNTNT GTATCTATTT 
    TTTTGNNCNC CAGTNTATAT TTTCATA

AT4G03540.1

Model type
Protein coding
Short Description
Uncharacterised protein family (UPF0497)
Computational Description
Uncharacterised protein family (UPF0497); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant (InterPro:IPR006702), Uncharacterised protein family UPF0497, trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT1G03700.1); Has 607 Blast hits to 607 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR