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53-2027-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16650758 [Map]; Strand: c
      • AT5G41630.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2027-1 - 5-prime edge 
    GAGGAATCTC TANTCCTNAG CTACGGAAGA GAAACTTCTC TTTCCACACT 
    AATGTTNATG TCACCTTCAA ACATTATTAT TAGCGTAACT ANTGTTTGGC 
    TCACAAAAAT CTCTGGAGGC NAATGATAAA AACTCGAGTC AAAACCATCC 
    GANNNGGAAG AGACGTATAG ACGAATATCT GATACATCAC GTTTCAACAC 
    ATTTTGTATC CAATCCAGCA CCCATCTTTC ATTGATAATA TGTTTACCAT 
    TAAGGCGGAA TTTGTTTATT CGAGCATTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 16650872 [Map]; Strand: c
      • AT5G41630.1 - [+] show detail - F-box/RNI-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2027-1 - 3-prime edge 
    TCCATCTGTA CCATTTCAAG ATAAAATTGA GTACGTTTAA CAAGCTTATT 
    TCTGGTTGTC ACGCACTCGA AGAATTAATG ATGATTAATT GGAAATGGGA 
    TGAGTCTTCG GAACCTGAAC CTTGCTTTGT GACCATATAT CTCCCAAGCC 
    TCAAGATACT AGAGTATTGT CGTTTTGAAA GATATCATGA GGCTAACGAT 
    AAAGTCTCAT TATTATTTCA TAATCCAAAG GTGGTCTACC TAGAATTTTT 
    TGATTCAATT GCGGATAGGT ATCAACAAGT GAGTTTCGAT TCACTTGNTG 
    AAGCTAGACT CGGAATTCGA CTGACNTNTG ATCAGGTCTA TAACCATTTG 
    GANACCGAAT ATTATGTTTC ATCCNGGGNA NANAGNAATG TNACNGGTCT 
    TNTCACTGGA ATATGCCCTG TCCCGAGGNG NTACTNGNGT NNTGAAACNC 
    TNGANGGNAA ANCCNNCTGG ATANNGATTT NTNANANAAA AANNGNNGGG 
    GGAAAAAACN CCNCTNTNTT NNAANATTNN TNGAGGGNNC CCCCCNNNGG 
    GNNNAANAAA AAAAAAGNCC NTGNTTTTTN NNNNNNNCNN NNNNNNCCCC 
    NNCC

AT5G41630.1

Model type
Protein coding
Short Description
F-box/RNI-like superfamily protein
Computational Description
F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G41840.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR