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Mutant Lines
53-2058-1

53-2058-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 19572919 [Map]; Strand: c
  - AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-2058-1 - 5-prime edge
```
GACCTAGACC GTTAAAACCC TTATCAATTT GGCTGAAACG GCAAATGGAA 
GAAGTGTCGT CGGAGATGGA AGTGGAGGTT CAAAATCGTC AGCTTTCGGA 
TTCTTCTCCG GCTCAAAACG TGAAGAAATT TGGGCTCAAG AACTCTATTC 
AGACCAACTT CGGCTCTGAC TACGTCTTCC AGATTGTCCC AAAGTAAAAG 
CT
```

3 prime edge [+] show sequence

Chromosome: 2; Position: 19573035 [Map]; Strand: c
- AT2G47790.1 - [+] show detail - Transducin/WD40 repeat-like superfamily protein
  Distance: -8; Region: promoter

GTCAGGGTTT GTTCGTTGAT CAAAACGAAA CGAGGATTAG CACTTACCTC 
TCTAAGTCAT AGAGAAGGTT ATAACTCTAT AGGTCAAAAT TTAGGCCTGT 
TTTAACCTTT TCGGCCCATT TAACGCACGG TCCAATACGA TTATTAGCCC 
AAGGAAACAA CAACCAACTC GCTCGCTCAC CGTGCGCTTC TTCTAAACAT 
GTCCATAGAA ACAGAAACAT ACTAAAATGT GAAAAGATTA AATTCAAAAA 
CGGATAGAAA CATATAGAAA GCCACGTGAT GGTAGCAAAC AGATTTAGTG 
GTTACAACCA GATATCATTT GATATTGAGA TTTATGAAAA TGTCCTTTTT 
CAATGGCTCC GATCGGTCAG TGATCGGATC TAATATTATA AAGGTGTGTT 
GACCCATAAC ATAATATTAT TACTAATACA AGTAACATGC GGTAATTAAC 
TCTATGTCGA TCTTTTTTCT CTGCATATAT ATCTTTTAGT CGGTTTTTTC 
GTTCTTGCTA ATCGTTATAT TCCTCTACAC ATGGCAATGG AAAAGAAACG 
AGTAACAACA AGTAGCCTGC AAATAATTAA GTGCGATAAG ACAACTCTGC 
TCTGATTGGA AACTGATATT CCGGCCCGTC CCCCTTTTAT TACGTAGGAG 
TAATAAAATT GGGAACGTCA ACTTATATTA ATCATGACGA CGTTTTC

AT2G47790.1

Model type: Protein coding
Short Description: Transducin/WD40 repeat-like superfamily protein
Computational Description: Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1); Has 11741 Blast hits to 7668 proteins in 457 species: Archae - 10; Bacteria - 2663; Metazoa - 3454; Fungi - 3073; Plants - 916; Viruses - 0; Other Eukaryotes - 1625 (source: NCBI BLink).
Link: InterPro Scan - TAIR