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Mutant Lines
53-2062-1

53-2062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24237900 [Map]; Strand: c
- AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: 1737; Region: intergenic
- AT5G60200.1 - [+] show detail - TARGET OF MONOPTEROS 6
  Distance: -3075; Region: intergenic

CATACATCCT AAGTTAATAC TTATAATTTC ATTAGAATGT GATAATTTTA 
ATTCTAATTA TTTTAGATGG TTAATTATAC CGTCGGTGTA ATGGTGTTTG 
GTTTGATTTT TTGGTAAGGA TGGTGTTTGG TTTGATGGTC TAGGCAATTG 
ATGAAGTCGA AAAACTTTAT TACTACTTTT GATTAAATCA ATGACTGCAT 
CAAGTTGGTC CATCTCATAA TTATGGTTTT AAAAAATATA ATGATCGTTA 
ATTGGTATAT ACACTACAAA ATTTAAGACT AATGAGAATA ATAATGGGTA 
AACTAACGTT AAAATTTACC AAAGTTGATA TAACTGGAAC AATTATTTGT 
CTTCTATTTT GCACCAATGA TAGGAAACAA GAGATGGCCT AGAAATTTGT 
AGGAAGAAAT TATGTATATG GAAGTAGAAC ACCAAAAAAA AAAAAAAANG 
GGGGGANCCC NANNGNAAAC NNTTNGGGGN TTTTTAAAAA AATTTTTTNN 
AAANAAAAAA AGNNAAAANN TTNGGCCNNN NCCCGNGNGG GNTTNAAANT 
TTTNAANNGA AAAANNNNNA AAANGGCCCN GGGNANNNNC CCCNGNNAAA 
CCCCCCCCCN AANTTNCCCC NCNNNNNNNA NGGGNANCAA AAAAAAACCC 
CNTTTTTTNA AAAAAANNNT TTTNAAACCN AAAAAAAAAC CCNNC

3 prime edge [+] show sequence

Chromosome: 5; Position: 24238016 [Map]; Strand: c
- AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: 1853; Region: intergenic
- AT5G60200.1 - [+] show detail - TARGET OF MONOPTEROS 6
  Distance: -2959; Region: intergenic

GATGTNTGAA ACCAAAGTNG TAGACTAAAC ATCCGAATTA GCATTAGGTC 
GAATAGGAAT TTTCTAAAAG TGTTATATTG GTGTAAACAA TATAACACTT 
ACAGTAACGA TCAACAAAAA TTACAGTAAC GATCACCTTT ATAAACTATA 
ATAAAAATGA CTAGTACCAT CATGTCGAGA TAGATTGCAA TATGATTCAT 
ATATATGATG ACATGAGAGA GAGCTCTCTT ATCTATACGA TCTGCTTTAA 
CTTCTTTTTA TTGCCCATGA AATTCTAGTT TTGTCACTTG TTGTCTTAAG 
ACACATTATA AAGCAACTGA AAATATTATA ACTTTGACTG GTCAACCCAA 
AACTCAATGT CTTTTTCTTC CATTCCTATT TTCCAGTGGT CCCACCACTT 
CAGTTATTAT AATGTTCGAT TCCTGAATTT ATGATTTTGA ATGGAAGATT 
CGTGTTATGG ATCACACTCT CATTCCTGTT TCTTCATCTC CACTTCTTTC 
GAAAATTGAT CTATGTTAAG ATTTATAAAT TAGTTTGGTA TTAACCTGTA 
TACATTTGTC TTTTAAACCT GCCAATATAA TTCTTGTGAA TTACGTTCTT 
GCCTGTTTAA AAGTTTGGTG GTCATCAAAT TTTTGGCTTA ATATCGTTTC 
GATTTGGTAT GAATTGAATA GAATAAACCA AGTCATTGGA TGATGTACAA 
TTAGGTTTCT

AT5G60190.1

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Curator Summary: Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins.
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, NEDD8-specific protease activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60200.1

Model type: Protein coding
Short Description: TARGET OF MONOPTEROS 6
Curator Summary: Encodes a Dof-type transcription factor.
Computational Description: TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR