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53-2064-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24504148 [Map]; Strand: c
      • AT5G60910.1 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: intron4 (CDS)
      • AT5G60910.2 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 53-2064-1 - 5-prime edge 
    GATGCAGCTA TCAAGAGCAT TAGGTCAAGA AAGGTAATAG GACAACATGG 
    ATACATAGTT ACATACGTCT ACATATTTAT GTAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24504264 [Map]; Strand: c
      • AT5G60910.1 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: exon4 (CDS)
      • AT5G60910.2 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2064-1 - 3-prime edge 
    GCTGCATCGA GCTGATGCTC CAAGCTTTGA AGCTCCTTCA AGCTCAACGA 
    ATCAAGATC

AT5G60910.1

Model type
Protein coding
Short Description
AGAMOUS-like 8
Curator Summary
MADS box gene negatively regulated by APETALA1
Computational Description
AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60910.2

Model type
Protein coding
Short Description
AGAMOUS-like 8
Curator Summary
MADS box gene negatively regulated by APETALA1
Computational Description
AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR