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53-2078-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 27318 [Map]; Strand: w
      • AT5G01075.1 - [+] show detail - Glycosyl hydrolase family 35 protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2078-1 - 5-prime edge 
    CCTCCAACCC CACTTTCATT TCTGTGTGTG TTTTCAATAT GTAATCATTA 
    ATGTATACAA TGAAAAACAT GAAAGAGAGT AACAAGGAGG ATTGATTTGA 
    TTACCAGAAG AAGAAGCTAG TAGTGAGAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 27196 [Map]; Strand: w
      • AT5G01075.1 - [+] show detail - Glycosyl hydrolase family 35 protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2078-1 - 3-prime edge 
    GGAGTACAAT TTTCCAGTGG ATCCAACTCC GACGACAAAA GCTTCGATAA 
    AACCAGGTCC TATTGAGCAT GGAACTCCTC TCAATCCTTA TATTCCTAAG 
    CCTCCTTCTC CTTCTTCATC TCNCTCGACG NNGCAATCCC AAGAGGGNGG 
    ATAACACCAA ATCTTTTCTC TGATTTTTTT TCCCCGTGAA TGTGATCTAC 
    GCACTGTTTG TNGTTATAAT TCCCACGTTT TTTTTCTTCT TTCTTCATCT 
    CACTCGAAG

AT5G01075.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family 35 protein
Computational Description
Glycosyl hydrolase family 35 protein; FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35 (InterPro:IPR001944); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR