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53-2083-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217107 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -875; Region: promoter
    Flanking Genome Sequence: 53-2083-1 - 5-prime edge 
    AATGGGTGGA AGACGATAGT CNAGGACGAA GATTTGAAAG GTGGANAGTT 
    CTTACAATTT GAGTTTGATG GCTCTTGGTG TTTCAATTTC TGTATCTATG 
    GTCGTGCAAC GTGTAAAAGG CTTAGAAGTT CAGTGCAAAT CACGGTTCTT 
    GATGACAATG ATTNTTNTTT TAATGATGGT CAAGATTATG GGGAAGAAGT 
    TNAATCTAGT GAAAATTTCA TAGTTCTTGA TGATGATGAT ATTAGTGATG 
    TNCAANATTA TAATGAGGAA GATACATCTA GTGAAGATAT TACNGCTCTT 
    GATGATGCTG ATAATGATGA TATTTAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217227 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -755; Region: promoter
    Flanking Genome Sequence: 53-2083-1 - 3-prime edge 
    CATTAACCAT AACAAATCTC TCACTATCAC CACAAAACTT CCTAAACGCC 
    ACTTTCCAGA TGTTTCCATA AATGCTTCTA ACAATTACAT TTTTAGGCAA 
    CGACTTTGGT AAAAAGCTGT TGAAAGAGAT GGGTAATTCC TGAAGAGGAA 
    GGATCTAAAA GTTTCAATAA ACTAAAAATC TACATATAAC CAAAAACAGA 
    GAGAGAAGTG TATTTTTACC AAATCATCTC CGGAATCATC AGGTAAGTAC 
    ACTTTGAAGA ACTTTGGAAG ACAATCATCC ACAGAAATTC CTGTTCCAAA 
    GCAAGAAAAA AATCAGAACA TAGGATAGGT TATGTGATTG GAGAATCAAG 
    AACAAACAAT AGCATAAAGA TCTTAACATA AAAACAAGAG TCTAAAGAAG 
    AAACCTCTGT TCATCATCTT CATCTCNCTC

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR