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53-2088-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1414405 [Map]; Strand: w
      • AT5G04860.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2088-1 - 5-prime edge 
    ATCGCCACCA CCATCGGAAT CCAACAAACC ATCCATCTGG TGAACAACGA 
    CGATCACGTC GAATTTAACG GCGAAGAGCG GAGGCCACGG TGGCCAACGC 
    ATGATCTGTT TCATTTTGAC CACCATACAA TTCACAAGTG GCCTGCAACA 
    AAAAACCTAA AAGGTTTGGA ATCTTAGAGA AAAAGGGTGT TGGAGTAATC 
    GAGATTTGCG GAGGAAAGAA TCGGATTTTA AGAGATGGAG ATGGAGGATT 
    TGGTGGACGC GGTGTGATTC AGACGCAAAA TATTTGAAAT TTGAAGAAAG 
    TGAGAGACAG AGAGAGAAAA GAGTAGAGAG AAGGAATCTC TGCGTTTGTT 
    TTCTTTAGAG TCAACCCTTA TAGAGATAGA GAGAGAAAAG GACGGTAATA 
    TTAAATTGTT GATTACAATA ATTAAATAAT GTATATAATT TAAAATTATG 
    TTTGACATTT TTTTCTTCTC TGTTTTTAGT ATAAAAGCTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1414289 [Map]; Strand: w
      • AT5G04860.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2088-1 - 3-prime edge 
    NTGGCGATGA TAGTACTGAT CAGAGTCAGC GAGGAGGANG GACAACANCG 
    AGGAAGAGAC CTGTTGTTGA GATCAAATGG AAAGGACCTA AATCGGTTAC 
    TCTCAAACGC TCCGTCGTAC GGAATCTCAC CGAAGAAGGT GGATTTCGCG 
    GCGATGGCGT CGTTGAATGG AACNAAGAGT TTAANAGGGT TTGCGAATTC 
    TCTGTTTACA AGGAAGGATC GTTTCTTCCT TGGTTCGTTT CTTTAACCGT 
    CTTCAGTGTT AGTCTCTCTC TCTATCTCCT ATCTTCTTTT AATTTCGTTG 
    ACTTTGATGT CTGAATGATC AGGGTCTGTT TAAAGGTTGT ACCTTTGCTT 
    ANGTCCTCTG TTATTTAGAT TTTGATTCAC TCTANAGATT TTTGGAACAT 
    ATGT

AT5G04860.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR