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53-2108-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24017844 [Map]; Strand: c
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2108-1 - 5-prime edge 
    CTGATAGCAA CCACTGACAT AAATAATTTC TAATATGTCA GAGAGAAACA 
    TTAAATAGAA TTAGACATTA TATGCATAAG GTTGAAACAT ACCGTCAGTT 
    TCATTTGTTT CAGACTGCGG AAACTGGATA GCTGTGAAGA CTTCAAGAGC 
    GTTAAGTAGA GGTGGAAGAG TTGATCTATT GGTTCTTTTC AGCTGAAAAG 
    TACAGTCCCC TCCATCGCAA GTCCTTGGAG ACTCGCTGTA GAAAGTACTT 
    ATATCTAGCT TATTAGGAAT CACAGGGTTA GCAGACATAA CATCTCCATT 
    CCATAGCATG TTGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24037263 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 53-2108-1 - 3-prime edge 
    GCTATCAGAA ACATTGAAGC CACCTATGAA TTGAGTAGAA TAAACTGGCA 
    AGGTGATCCA TGTGTCCCTC TACATCTTAG GTGGGACGCT TTAAACTGCA 
    GCAACACGGA TGCCTCCACA CCACCAAGAA TCACTTCTTT GTAAGTCATG 
    AGTTCACTAG TACACATGCA CGCACAGTCA CTCTTCAAAT CCGTTGGTAA 
    TCATGATCAT TAACAACTTT GAATGTGGTT TTGAAAATGT CACCAGAAAC 
    TTGTCTTCGA GTGGTTTAAC TGGAAACATA GCAGCTGCCA TTCAAAACCT 
    TACGCAACTA GAAAAACTGT AAGTATGTCC ATTGTTAGTT GTAAGCAAGA 
    AATTGTTCTA TATATGCGAA GAAATCAGAT GTAATAATAG CATAGATAAT 
    TCTCTCTTTG CTAACATTAG GGA

AT5G59616.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR