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53-2129-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048677 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 53-2129-1 - 5-prime edge 
    GCAACAAGAC ATACTTACAG CTTTTCTAGT GTCGTAAGAT TTTGAATGGC 
    AGCTGCTATC GTTCCAGTTA AACCACTTGA TGACAAGTTT CTGGTGAAAT 
    TTCCAAAACC ATATTCAATA ATATGATCAT GATCACNTTA TAGATCCTGA 
    TGTGTATACT AGTGAACTAA TGGCTTACAA AGTAGTGATT CTTGGTGGCG 
    TGGTTATATC TGTGATGCTG CAGTTTAAAC CATCCCACAT AAACTGTTGA 
    GGGACGCATG GATCGCTTTG CCAGTTGATT CTACTCAATT CATAGGAAGC 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24048793 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-2129-1 - 3-prime edge 
    CTTGTTGCTG ATCAAATGTT ACGTGTATGC AAAAAAAAAA TGTTATGTAA 
    TATGGTATTA TATTCTCTCT TGTTAACTTT AGGGACTTGT CNAATAATAA 
    CCTTGACCGG ANAGGNGCCA NAATTTCTAA NCAACATGAA ATCGCCTGTN 
    GGTCATGTAA GTTTCTCGCA AAAACATATT TTCCAAAATG CTTTTCACAT 
    TCCACCTTGG ATCATGTTCA TGCATGTNTC ACAATTTCTN TTTTTTTTTN 
    NCAAAACCTN AACCGGNANC AATTTNANNG GNCCANTNCC TNANTNTTTN 
    NAANGNAANG GNCTNGACCT CNNGNAAAAA NCTCCCACCC NGGNCCGTNA 
    NCCNCCNNGN CCCCTNAAA

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR