Home
Mutant Lines
53-2145-1

53-2145-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24239285 [Map]; Strand: w
- AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
  Distance: 3122; Region: intergenic
- AT5G60200.1 - [+] show detail - TARGET OF MONOPTEROS 6
  Distance: -1690; Region: intergenic

CATGGGTTAC TCTTTTTTTT TCTCCACGAC ACAAGATTTA ACATAAATCG 
TATACTATAT AAAGATTACG TAAACAATAA TATAAAATAT ACTGTATAAT 
GTTTTGNGTG GATATGGTCC TTANACCAAA TCTCGGTCTT TCATANAAGT 
CTCTTTCCCG AAAACCAATG TGGTAGTGTG ATTTGTGTCT CTATGAACTT 
TANATCCCCA TCAGATAATG CGAGCACATC ATGAGCTACA CATTGTCCGG 
CATATTCTTT GCTTTTACTT CATCATGTGT TCTATTTACA TATATACTTA 
TGATTATTTA TAAAACAATG TAAGCGTATA TTATATCCAC CATTTTTTAA 
TTTANATTTC ANAGTANAAT TGTAGTTTTA TTCAACAAAT TATATAAAGT 
ATAATAGAGT ATAAATTTAG AATGAACAAA AAATTGTAGC CCAATATGTC 
TTGACAAAAA TAGAAACATT TGTGGTCCTA TCAAATAAAG AGTGTTGGTC 
CAAGATGATT NTTTTTTCTT TTTTTTTNCT TTTGGACNGN AAGNACATTA 
NNTTGGCTGG ATTTGNAAAA ATNTGGGTTN AAAATTAAGG CANNGGAAAT 
GGGGNGGACA AATTNAAAAT CTTTTTGGNA AAATTTNCNA AAAAANAAAC 
AANACTTTTT NNAATTTTTT TTNTGCCCTT TAAATTNAAA TAN

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24239169 [Map]; Strand: w
  - AT5G60190.1 - [+] show detail - Cysteine proteinases superfamily protein
    Distance: 3006; Region: intergenic
  - AT5G60200.1 - [+] show detail - TARGET OF MONOPTEROS 6
    Distance: -1806; Region: intergenic
Flanking Genome Sequence: 53-2145-1 - 3-prime edge
```
AACCCATGTT AGTATATATC ATGAATAAGA TCGTTACTTG TTCCTCTAGA 
AATTTTTTCT TCTGTCTTAC TACTTAGTTG AAAACATGTT TCTTTGTTTA 
CTACGAAAAC GAAAACGTTA ATGTGACAAT GGAAGTAGCT AGAGACGGAT 
CAATCATTCA ATAAATCCCA CTTACTATAC TCTTTCTTTC GTTTCATGTC 
ACTCGA
```

AT5G60190.1

Model type: Protein coding
Short Description: Cysteine proteinases superfamily protein
Curator Summary: Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins.
Computational Description: Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, NEDD8-specific protease activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60200.1

Model type: Protein coding
Short Description: TARGET OF MONOPTEROS 6
Curator Summary: Encodes a Dof-type transcription factor.
Computational Description: TARGET OF MONOPTEROS 6 (TMO6); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G45610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR