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53-2152-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 27420972 [Map]; Strand: w
      • AT1G72860.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: -194; Region: promoter
      • AT1G72870.1 - [+] show detail - Disease resistance protein (TIR-NBS class)
        Distance: -51; Region: promoter
    Flanking Genome Sequence: 53-2152-1 - 3-prime edge 
    ATTATCTTAC AAAAGTCAAC GGATTAAAAA CGAATATTGA CGACGTGCAA 
    CTGTGTCACA ACATGGATTC TTCTTCCTAT TGGACCATGA ATTTGATATC 
    ATTATATGGA CAACGTGCAA GTGTGTGTAT CATATCCATC AATTGGGGGT 
    CTTATCGAAC TCTGAATTTG AGATGATTTG TTAAACCTGC AGCAAACCTT 
    TTTTTCTTCC TCCTCCTTCT TTAATTTGGC GCATAGTTGA CCGATGGCTT 
    CTTCGTCCTC ATCAACCCCT ACCTGGAAGT ATGATGTGTT CCTAAGTTTC 
    CGGGGAGAAG ACACCCGCAA GAACATCGTC AGCCATTTGC ACAAAGAACT 
    TGTCAAAAGC GGAGTTGTTA CGTTCAAAGA TAATTTAAGG CTTGAGCTCG 
    GCGACTCCAT TTCCGAAGAG ATCAGCAGAG CCATCCAAGA ATCTTCATTT 
    GCTCTTGTTA TTCTATCGGA GAACTACACT TCATCTAGTT GGTGCCTGGA 
    CGAGCTCCGT ATGGTAATGG ATCTTCACCT GAAGAATAAG ATTAAAGCCG 
    TCCCCATTTT CTATGGAGTT GATCCTTCTC ACGTGAGATA TCAGACTGGT 
    AGTTTCACAT TGGACAAGTA CCAAGACTCA GAAAAGGCTA ACAAGGTCAC 
    AACTTGGAGA GAAGCTCTCT CCCAGATCGC CAGTTTAGCA GGCAAGGATT 
    TTGCAACTTG GTAAG

AT1G72860.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, leaf; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G17600.1); Has 17128 Blast hits to 12682 proteins in 562 species: Archae - 4; Bacteria - 839; Metazoa - 1175; Fungi - 47; Plants - 14820; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G72870.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS class)
Computational Description
Disease resistance protein (TIR-NBS class); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sperm cell, root; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS class) (TAIR:AT5G48780.2); Has 7950 Blast hits to 7386 proteins in 227 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 7937; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR