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Mutant Lines
53-2161-1

53-2161-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26418700 [Map]; Strand: c
  - AT5G66055.1 - [+] show detail - ankyrin repeat protein
    Distance: 0; Region: exon1 (CDS)
  - AT5G66055.2 - [+] show detail - ankyrin repeat protein
    Distance: 0; Region: exon1 (CDS)
  - AT5G66060.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -781; Region: promoter
  - AT5G66060.2 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Distance: -781; Region: promoter
Flanking Genome Sequence: 53-2161-1 - 5-prime edge
```
TCCNCAAGTA CAAGGAAGCC AAGTTGGCTC AATTGAGGCC TGTCATTCTC 
GATAAACCGG GCAATTTCTC CGACGACAAT GGAGCGTCAA GCGATGGAGA 
NACCGCTGTA TCATCTCCCA GCGAGCGAGT GGCTCCTAAG AACCCTAGAT 
GGGCAGTTTA CGGAAAGGGA TTCGACCACG TTGCCAAGTT CTTCAATAGC 
GACAAGTACG ATCCCANCGA CAAGAAATCC GACGGTATAC GTTTACCACT 
CTTGTTTCCT TCTCTTGCTT GAATTGCAAA AAGAGCTTAT ATTTGGCTGA 
TCCCTCGTTA GGCCCTCGAA AGCTGCTTTC AAAAGA
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26424183 [Map]; Strand: c
- AT5G66080.1 - [+] show detail - Protein phosphatase 2C family protein
  Distance: 0; Region: intron2 (CDS)

GAGACAACTA AGCTTTCAAG ATTGTGACAA GTTGCCAACA ANAATGAGCT 
TATCCANCTC AGTGAAGGAA CATGACATAA TANTATTGGC TCAGATTTTA 
NAGCATAAGA AGATCTCTTT GTAGAGAGCG GCACCTGAAT AATGCCCTTA 
ACACGCCAGA CATTGTGTTT TAAGACGACA ATATGGGAGT CATCAGGGTG 
TAAGGAGTGC ATTTCCTGCC TCACAGACTC TATGCTCACG TTATGCTCAG 
CTGAGAGCTG AAGCGCATTA ACCTCACCTG TGGCCTTGAT GACCTTTCCC 
AGAACCGCAC GGGAGTCCCC AACGTTAGCT ACGTAAAGCT TCCCATCGCA 
GACCACACCG ATCAGGCAAC AAGAGCCAAC CGCTGCTATA TGTGGCTTCA 
CTGC

AT5G66055.1

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 83523 Blast hits to 28077 proteins in 1268 species: Archae - 145; Bacteria - 7202; Metazoa - 43238; Fungi - 6726; Plants - 3393; Viruses - 1185; Other Eukaryotes - 21634 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66055.2

Model type: Protein coding
Short Description: ankyrin repeat protein
Curator Summary: A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Computational Description: ankyrin repeat protein (AKRP); CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT5G40160.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.1

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, L-ascorbic acid binding, iron ion binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1); Has 2544 Blast hits to 2536 proteins in 339 species: Archae - 0; Bacteria - 388; Metazoa - 1050; Fungi - 75; Plants - 443; Viruses - 21; Other Eukaryotes - 567 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66060.2

Model type: Protein coding
Short Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Computational Description: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction, peptidyl-proline hydroxylation to 4-hydroxy-L-proline; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G20270.1).
Link: InterPro Scan - TAIR

AT5G66080.1

Model type: Protein coding
Short Description: Protein phosphatase 2C family protein
Computational Description: Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR