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53-2162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20054189 [Map]; Strand: w
      • AT5G49460.1 - [+] show detail - ATP citrate lyase subunit B 2
        Distance: -334; Region: promoter
    Flanking Genome Sequence: 53-2162-1 - 5-prime edge 
    TTAATAATCT TTATCACTTT ACTTCAATAT ATACGAACAT AAGTTTTATT 
    GCACAATTGA TTAACCACTT TCACTTCCAT AAGAAAGTAT AAGCCAAAAA 
    AAGAGTCCTC TCTTTCTATC ATTCTCTCCA AGTATTCATT AGTCATGTTT 
    CTTTACATTT ATTTATGTTT GTGATTAGGA AGAAATTATA ACACGTTCTA 
    ACTTTTAAAA TACTTCAAAA ACACATTAAA CAATGTTTTG ATGAATGCGT 
    GATTCACAAT CTTCAAAAAA TATTGCTGAA TCTTGAAGAC AAAACAGCCT 
    ATTCATTAAC ACCACCAGCA AG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 20468167 [Map]; Strand: c
      • AT5G50300.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: -43; Region: promoter
    Flanking Genome Sequence: 53-2162-1 - 3-prime edge 
    AATGCAGGAG GAGGATGTCA TGCATATATA CTTAATGATA TGAATACACA 
    GAATTATGTG AACACAAACT AAAATATACA AAGTTGACAA GGAAAGAAAC 
    TCAAATATGA TCAAATTGCA AAGAAAACAA ATATATTTCT CTATTCGACT 
    AAGACAAATT TAATACAAAA AGCTTCACAA CCACGTGATA CTCTCTTGTA 
    TCTATGGAAG AAAATCAAAA TATCTAAGCC TATTTTGACC GAAATTTTAT 
    GATTTGAAAA TTGTTACTTT TTCGGGTTAC AATAGATAAA GGACCAAACA 
    AGTCATTGTC TAAGAAGCTT GGCATTGGCT TCTAATCAAA CCATAT

AT5G49460.1

Model type
Protein coding
Short Description
ATP citrate lyase subunit B 2
Curator Summary
One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)
Computational Description
ATP citrate lyase subunit B 2 (ACLB-2); FUNCTIONS IN: ATP citrate synthase activity; INVOLVED IN: acetyl-CoA biosynthetic process; LOCATED IN: cytosol, citrate lyase complex, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Succinyl-CoA synthetase, beta subunit, conserved site (InterPro:IPR017866), Citrate synthase-like, small alpha subdomain (InterPro:IPR016143), Succinyl-CoA ligase, alpha subunit (InterPro:IPR005810), ATP-citrate lyase/succinyl-CoA ligase (InterPro:IPR005811), NAD(P)-binding domain (InterPro:IPR016040), Citrate synthase-like, core (InterPro:IPR016141), ATP-citrate lyase/succinyl-CoA ligase, active site (InterPro:IPR017440), Citrate synthase-like (InterPro:IPR002020), Succinyl-CoA synthetase-like (InterPro:IPR016102); BEST Arabidopsis thaliana protein match is: ATP-citrate lyase B-1 (TAIR:AT3G06650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G50300.1

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Curator Summary
Encodes a homolog of the adenine-guanine-hypoxanthine transporter AzgA of Aspergillus nidulans. Function as a plant adenine-guanine transporter. Two closely related genes exist in Arabidopsis: AT3G10960 (Azg1) and AT5G50300 (Azg2).
Computational Description
AZA-GUANINE RESISTANT2 (AZG2); FUNCTIONS IN: transporter activity, purine transmembrane transporter activity; INVOLVED IN: transport, purine transport; LOCATED IN: membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: AZA-guanine resistant1 (TAIR:AT3G10960.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR