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53-2166-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215659 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -206; Region: promoter
    Flanking Genome Sequence: 53-2166-1 - 5-prime edge 
    AAGCGGACCA AGGTATCGCT AAGGCCCAAA CAAAAAANAA GAAATGGGCC 
    TNAAGTTTGG TTCAATCTAT ATCGTGTAAA TGACATTATC GTCCTTAAAC 
    AAAAGAACCA CNGTAAAGAG TCGAGAAGGG TATATTAGAG AAAGAAGGAC 
    TTGTGACATC TCAATTCTTG AACAAGAAAC TTGAAACTTG AAAGAAGAAT 
    GAGATAGTGT TAAGTGGCAG AGTTCCAAGT ATCTTAGTAT NATCTACCCA 
    CCAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215543 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -90; Region: promoter
    Flanking Genome Sequence: 53-2166-1 - 3-prime edge 
    GTCCGCTTAA CGAATTATTT TTGAATAAGA AGAGTACTAT TAATGGTTTG 
    TTTTCCATTT GAAGGAAAAA GCATCGAAAC AGAGAGAACC CTCTGTTTTT 
    GCAAGTTTTT GCTACAAAAG GCCAACACCT TTAGATCAAA TCACATCTGG 
    AAAAACTTGG ATCTGGAGAA ACTTTGTTCA CCTTTTTATT TCCGATCAAA 
    ATTAGGGTTC AGAGTATTTC CAAGAGCACA AGAAGTTGAC GACAATGAAC 
    ACAAGAGGTT TTTCACTTCT CTGTTCCTGA TTCTTCCCTT GTAATGTGCT 
    CTGTACATTG ATGTTCTTCC T

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR