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Mutant Lines
53-2168-1

53-2168-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 18436907 [Map]; Strand: c
- AT1G49790.2 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G49790.1 - [+] show detail - F-box associated ubiquitination effector family protein
  Distance: 0; Region: exon1 (CDS)

GACGAAGAGG TCGATATGCT CTATCTAAAC TGCAATGTCG CCTCACGACC 
GTCTTTATCA TGTGACGGTC TGGTTTGCAT CCCCATACCT GGCTGGATCA 
ACGTTTTAAA CCCTTCCACT GGAGAATTCC TTAGATTCTC TTCTGGTCGA 
GATCCACGGT TAATCAACGA CTTCGAATGC GTCGGTAATT TAAATCTCTA 
TTGTTTTTTT TTAATTCTTG TGAAAATTGT GTGATGGTTC TGAAAAAAAA 
TTGAAATTTT GCANATTCTA ANTTTGATNT TTTCCCTGGA TTTTGGACNA 
TGGGATTCGG TAGGGACAAC NTTAATGGGA GCTATA

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 18437021 [Map]; Strand: c
  - AT1G49790.2 - [+] show detail - F-box associated ubiquitination effector family protein
    Distance: 0; Region: exon1 (CDS)
  - AT1G49790.1 - [+] show detail - F-box associated ubiquitination effector family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-2168-1 - 3-prime edge
```
CNTCTTCNTN CCCTTCGAAT NGCGGTCGGA ACCGGTTCCG GTCTCTGGCG 
GCCATAATTT TCAGCTTCTT TTGAACATTC ATACGCCTCT CCGCGAACAT 
TCTCGATTCC AGTATTGATT TCCATTGTTT TGAGACGGTT TTGAATTTGA 
GGATTCATCT CACTCGANNA
```

AT1G49790.1

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G43260.1); Has 394 Blast hits to 393 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 392; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G49790.2

Model type: Protein coding
Short Description: F-box associated ubiquitination effector family protein
Computational Description: F-box associated ubiquitination effector family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G43260.1); Has 397 Blast hits to 396 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 395; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR