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53-2171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049892 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron10 (CDS)
    Flanking Genome Sequence: 53-2171-1 - 5-prime edge 
    TATCAGACCA TTAGATCCTT TCATGTTTTC ATGAGTTCAT GATACATATT 
    ATAACCATTA GAAAATGTTA CATCGAGTTT TACCAGACAA ATGTTGTCTT 
    AAGTCTCCAT TGGGTACAAA CTCGTAGATA AGGGCCAAGT GGTCTCCTTC 
    ATCACAATAT CCGACAAGGC TTACCAAATT CGTATGGTGA ACTCTCAGAA 
    GAAGATCAAC CTAATGCACT CATGCAAAGG AAAACAAAAA AATTAGGTTT 
    CTGCTGTTGA AAACAGATAC TAGTTGGAAA GATTGTATTG GAAATACCTC 
    TGCCTTGAAC TCTTTATAAC CTTGAGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24050008 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon11 (CDS)
    Flanking Genome Sequence: 53-2171-1 - 3-prime edge 
    GTCTGATATA TAGGAAAAGG AGGTAAACCC ATCGTCAATT GGGGTACTCG 
    GCTAAGAATA GCGGTGGAGG CAGCACTAGG TTTGTACCAA GTTACACTGT 
    AGAACTTGAA TCCATTCGAT TGGTTTTACA AGAATCATTT TGCATAGGTT 
    TGGAGTACTT ACACATTGGA TGCACACCAC CAATGGTTCA TAGAGATGTC 
    AAAACTACAA ACATATTGTT GGACGAGCAT TATAAGGCCA AACTTGCTGA 
    TTTTGGACTC TCAAGGTCTT TCCCCGTTGG AGGGGAAACT CATGTTTCGA 
    CTGTGATTGC TGGTACTCCT GGATACCTTG ATCCAGAGTA AGTATTACAT

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR