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53-2192-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8455483 [Map]; Strand: c
      • AT4G14740.2 - [+] show detail - Plant protein of unknown function (DUF828) with plant pleckstrin homology-lik...
        Distance: -1455; Region: intergenic
      • AT4G14743.1 - [+] show detail - pseudogene, hypothetical protein, similar to putative reverse transcriptase
        Distance: 2991; Region: intergenic
    Flanking Genome Sequence: 53-2192-1 - 5-prime edge 
    CATGCAAGTA GAGAAGAAAG AAGATCACAT TTTTGAGATT CTANTCTAAC 
    GTACAAATTA GTTGCAGTGC AGTGTAGTTT AGTTCCAGTC CAACACNTAC 
    GACGTACTTC TTTTGCTTTA CAAATGTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8455599 [Map]; Strand: c
      • AT4G14740.2 - [+] show detail - Plant protein of unknown function (DUF828) with plant pleckstrin homology-lik...
        Distance: -1571; Region: intergenic
      • AT4G14743.1 - [+] show detail - pseudogene, hypothetical protein, similar to putative reverse transcriptase
        Distance: 2875; Region: intergenic
    Flanking Genome Sequence: 53-2192-1 - 3-prime edge 
    CTTGCATGCA CAAATACTGT ATGCTTCCGT ACATTCAGTT TCACAATAGT 
    CTTGTCAAAT GCATCTTCGC TTCCCTGTCT AAATATGATC ACTTTACATA 
    GTTTATTTTG AAACAATCGC AAAAAACAAA TAGCTTTTCC AAACAGTGCT 
    GCTGTAACTG AGATATTGTG AATTATACGT GGTGATGTTT AACAGTATAT 
    GTGGTACAAT TTTGGATTAT AAGTTGGTGA AGAAGATTCC TTTATTTTTG 
    TGGGTTTAGG TTAGAGATTG AGTTTGCACA

AT4G14740.2

Model type
Protein coding
Short Description
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region
Computational Description
FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828 (InterPro:IPR008546); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region (TAIR:AT3G22810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G14743.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein, similar to putative reverse transcriptase
Link
InterPro Scan - TAIR