1. Home
  2. Mutant Lines
  3. 53-2195-1

53-2195-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9199833 [Map]; Strand: c
      • AT3G25260.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2195-1 - 5-prime edge 
    CCTACGAAAT TAGTCACCAT GGTTGCTGCT TTGGGTGTTG AGTAATTCAT 
    TGATTTCGTA AAGTACATCA TGAAGTTGGT TGAACATGCT AAGAACACCA 
    TATTCTCCAT CGTCTCTACA ACTATCCATT AGACCATACC AAACTCGTGA 
    TGAATATCTT ATGATATTAG TGATTTTTAA ATGGTTTTTT TTTTTTGGGG 
    TTTNAAAAGG TCCCCCCANC CANGNAAGNC NNTTTNANCC CCCCCNNNTN 
    GNCCAAAANN GNCCTTTTNN CCNNCCNANT TTNAAANNTT TTTTNCCTTN 
    NAANTNGGNT TTTTTTGGNT TTTTNAANTA AACCTTNNAN GNAAAAAAAN 
    TNGGGGGGTT NNNTTNGGGT TNNNCCGGGG GAAANCCCTN NANNTCCCCG 
    GGGGGGGGGG GNTTTTNGGG TTGGGGTTNA AAANNCCCTA AAAAAAACCC 
    NGGGGNNNAN NGGNANNAAN NAAAAAAACN GGNNGNCTTT CNTTTTTTTG 
    GCCCCNTTTC NNNGGGGCCC CCGGCNTTNA AANTTGGTTT NGNGGNNTTT 
    GGNCCGGNGC CAAAAANNNA NAANNTTTTT TTTTNCNTTT NGNAATNCCN 
    NNNNNNTTTN CCCCAATNTN GNNNGGGNGG NTTTTTGGCN AAAAAAACCT 
    TNNCCCNNNN AANNNNGNAA TNAAAAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9199952 [Map]; Strand: c
      • AT3G25260.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2195-1 - 3-prime edge 
    ATAGGGACAT CGTTTTTGCT CACTATTTTC GGTGGTTTTG TCGCGGACTC 
    TTTTCTCACT CGCTTCGCTG CTTTCGTCCT CTTTGGTTCC ATTGAACTCC 
    TGGTAATTCA TAAACTCTAT TAAATCATGT TAAACAACAG TCTTTTCCTT 
    TTTATATGAA AAGTTTACTC TTTTCTTTGA TANGGTTTGA TCATGTTGAC 
    ACTCCAAGCT CATATCACTA AGTTACAACC TCAAGGAGGT AAAAAACCTT 
    CGACTCCTCA ATCAACNGTT CTATTCACTG GACTTTATGC AATANCTATT 
    GGTGTTGGAG GTGTCAAGGG GTCGTTGCCT GCTCATGGAG GCGA

AT3G25260.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: embryo, flower; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G25280.1); Has 5539 Blast hits to 5469 proteins in 994 species: Archae - 0; Bacteria - 2299; Metazoa - 478; Fungi - 300; Plants - 2122; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Link
InterPro Scan - TAIR