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53-2197-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24211325 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron9 (3UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron9 (3UTR)
    Flanking Genome Sequence: 53-2197-1 - 5-prime edge 
    CTCAAATATG TGTTTGAGAT TGACAGAGAA GCAGAAAACA GGAGGGTGAT 
    AATACTACAC AACTTGGAAC TCTTCCTTAG TCTTCTTCTA TTCNCNAAAC 
    ATTCATCATA CTTTTCATGT TTCCATCAAG ATTCATATGA ATACAAACAT 
    CTCAAACTCT TTTTCTTTAG TGGTCTTCTA TCAAAAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24211442 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron9 (3UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: intron9 (3UTR)
    Flanking Genome Sequence: 53-2197-1 - 3-prime edge 
    NTTTGAGGNN ATNNTNTTCC TAAGATCCGN CAATACTCAC ACGTAATNAC 
    ATACTTTGTA TGTGAACGTG CNGGTTCTAC ANGNCCCTGA GGTTGGAANG 
    AGTTGGAAGG CCACCCAAAA CNACGCTGAA TTCTCCCNNG ATCNGTTGTA 
    CTTATNGTCA TTGTGTGATT TNTCTTNCTG NGTTTGATTT GTTACATANA 
    CTGAGGGATA ATACCNAAAN AGAACCCNNA CCNATGTGCC ATTTNACNAA 
    AANGTCTCTG ATATGAANAT GANCAGCGTN NAGTACNATG CATTCTANNT 
    GTATGAANNA NNAAAGNNTT TGAGACTTGA NAGACTANCA ATTTGTNTAG 
    ATCTGANAAG T

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR